Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim34aQ99PP6 Gm15487-201ENSMUST00000122373 465 ntBASIC18.36■□□□□ 0.53
Trim34aQ99PP6 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC18.36■□□□□ 0.53
Trim34aQ99PP6 Gm6944-201ENSMUST00000182449 1006 ntBASIC18.36■□□□□ 0.53
Trim34aQ99PP6 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.36■□□□□ 0.53
Trim34aQ99PP6 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim34aQ99PP6 Gm7775-201ENSMUST00000218871 853 ntBASIC18.36■□□□□ 0.53
Trim34aQ99PP6 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim34aQ99PP6 AC090659.2-201ENSMUST00000225378 1186 ntBASIC18.36■□□□□ 0.53
Trim34aQ99PP6 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.36■□□□□ 0.53
Trim34aQ99PP6 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim34aQ99PP6 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim34aQ99PP6 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Trim34aQ99PP6 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim34aQ99PP6 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim34aQ99PP6 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.36■□□□□ 0.53
Trim34aQ99PP6 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim34aQ99PP6 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim34aQ99PP6 Mxra8os-201ENSMUST00000097740 687 ntBASIC18.36■□□□□ 0.53
Trim34aQ99PP6 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim34aQ99PP6 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim34aQ99PP6 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
Trim34aQ99PP6 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim34aQ99PP6 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim34aQ99PP6 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Trim34aQ99PP6 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim34aQ99PP6 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim34aQ99PP6 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim34aQ99PP6 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim34aQ99PP6 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC18.35■□□□□ 0.53
Trim34aQ99PP6 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim34aQ99PP6 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim34aQ99PP6 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim34aQ99PP6 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim34aQ99PP6 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trim34aQ99PP6 Gm14719-201ENSMUST00000121891 340 ntBASIC18.35■□□□□ 0.53
Trim34aQ99PP6 Gm11424-201ENSMUST00000121929 829 ntBASIC18.35■□□□□ 0.53
Trim34aQ99PP6 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC18.35■□□□□ 0.53
Trim34aQ99PP6 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim34aQ99PP6 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim34aQ99PP6 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim34aQ99PP6 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trim34aQ99PP6 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim34aQ99PP6 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim34aQ99PP6 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim34aQ99PP6 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.35■□□□□ 0.53
Trim34aQ99PP6 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trim34aQ99PP6 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim34aQ99PP6 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Trim34aQ99PP6 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trim34aQ99PP6 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trim34aQ99PP6 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim34aQ99PP6 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim34aQ99PP6 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim34aQ99PP6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim34aQ99PP6 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC18.34■□□□□ 0.53
Trim34aQ99PP6 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim34aQ99PP6 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim34aQ99PP6 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trim34aQ99PP6 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim34aQ99PP6 AC132863.2-201ENSMUST00000226643 799 ntBASIC18.34■□□□□ 0.53
Trim34aQ99PP6 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim34aQ99PP6 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim34aQ99PP6 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim34aQ99PP6 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim34aQ99PP6 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim34aQ99PP6 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim34aQ99PP6 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Trim34aQ99PP6 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim34aQ99PP6 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Trim34aQ99PP6 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trim34aQ99PP6 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim34aQ99PP6 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
Trim34aQ99PP6 Gm16215-201ENSMUST00000161990 637 ntBASIC18.33■□□□□ 0.52
Trim34aQ99PP6 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim34aQ99PP6 H2-Pa-201ENSMUST00000182803 626 ntBASIC18.33■□□□□ 0.52
Trim34aQ99PP6 Gm27838-201ENSMUST00000184829 128 ntBASIC18.33■□□□□ 0.52
Trim34aQ99PP6 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC18.33■□□□□ 0.52
Trim34aQ99PP6 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim34aQ99PP6 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Trim34aQ99PP6 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Trim34aQ99PP6 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.33■□□□□ 0.52
Trim34aQ99PP6 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim34aQ99PP6 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Trim34aQ99PP6 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim34aQ99PP6 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim34aQ99PP6 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.32■□□□□ 0.52
Trim34aQ99PP6 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Trim34aQ99PP6 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Trim34aQ99PP6 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim34aQ99PP6 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim34aQ99PP6 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trim34aQ99PP6 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim34aQ99PP6 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim34aQ99PP6 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC18.32■□□□□ 0.52
Trim34aQ99PP6 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim34aQ99PP6 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim34aQ99PP6 Gm45098-201ENSMUST00000207179 657 ntBASIC18.32■□□□□ 0.52
Trim34aQ99PP6 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC18.32■□□□□ 0.52
Trim34aQ99PP6 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms