Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh15Q99PJ1 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.62■□□□□ 0.25
Pcdh15Q99PJ1 Gm7287-201ENSMUST00000205267 602 ntBASIC16.62■□□□□ 0.25
Pcdh15Q99PJ1 Gm19078-201ENSMUST00000206311 727 ntBASIC16.62■□□□□ 0.25
Pcdh15Q99PJ1 Gm7561-201ENSMUST00000211203 886 ntBASIC16.62■□□□□ 0.25
Pcdh15Q99PJ1 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.62■□□□□ 0.25
Pcdh15Q99PJ1 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pcdh15Q99PJ1 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Pcdh15Q99PJ1 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh15Q99PJ1 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh15Q99PJ1 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdh15Q99PJ1 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh15Q99PJ1 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh15Q99PJ1 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh15Q99PJ1 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh15Q99PJ1 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh15Q99PJ1 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh15Q99PJ1 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh15Q99PJ1 Gm11803-201ENSMUST00000119966 444 ntBASIC16.61■□□□□ 0.25
Pcdh15Q99PJ1 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC16.61■□□□□ 0.25
Pcdh15Q99PJ1 Gm26464-201ENSMUST00000157094 305 ntBASIC16.61■□□□□ 0.25
Pcdh15Q99PJ1 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.61■□□□□ 0.25
Pcdh15Q99PJ1 Gm42442-201ENSMUST00000197951 1133 ntBASIC16.61■□□□□ 0.25
Pcdh15Q99PJ1 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdh15Q99PJ1 Gm44974-201ENSMUST00000206387 1279 ntBASIC16.61■□□□□ 0.25
Pcdh15Q99PJ1 Gm7172-201ENSMUST00000218047 1152 ntBASIC16.61■□□□□ 0.25
Pcdh15Q99PJ1 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdh15Q99PJ1 Gm6091-201ENSMUST00000098307 165 ntBASIC16.61■□□□□ 0.25
Pcdh15Q99PJ1 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdh15Q99PJ1 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh15Q99PJ1 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh15Q99PJ1 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh15Q99PJ1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh15Q99PJ1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh15Q99PJ1 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pcdh15Q99PJ1 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh15Q99PJ1 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdh15Q99PJ1 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh15Q99PJ1 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.6■□□□□ 0.25
Pcdh15Q99PJ1 Gm24644-201ENSMUST00000157114 139 ntBASIC16.6■□□□□ 0.25
Pcdh15Q99PJ1 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC16.6■□□□□ 0.25
Pcdh15Q99PJ1 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdh15Q99PJ1 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC16.6■□□□□ 0.25
Pcdh15Q99PJ1 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.6■□□□□ 0.25
Pcdh15Q99PJ1 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh15Q99PJ1 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh15Q99PJ1 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdh15Q99PJ1 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh15Q99PJ1 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh15Q99PJ1 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh15Q99PJ1 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh15Q99PJ1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh15Q99PJ1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh15Q99PJ1 Gm7553-201ENSMUST00000185805 1426 ntBASIC16.6■□□□□ 0.25
Pcdh15Q99PJ1 Gm11814-201ENSMUST00000119515 929 ntBASIC16.6■□□□□ 0.25
Pcdh15Q99PJ1 Gm15376-201ENSMUST00000122258 783 ntBASIC16.6■□□□□ 0.25
Pcdh15Q99PJ1 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC16.6■□□□□ 0.25
Pcdh15Q99PJ1 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh15Q99PJ1 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdh15Q99PJ1 AC126253.1-201ENSMUST00000227974 824 ntBASIC16.6■□□□□ 0.25
Pcdh15Q99PJ1 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Pcdh15Q99PJ1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh15Q99PJ1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh15Q99PJ1 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh15Q99PJ1 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC16.59■□□□□ 0.25
Pcdh15Q99PJ1 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC16.59■□□□□ 0.25
Pcdh15Q99PJ1 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh15Q99PJ1 AC159747.1-201ENSMUST00000219903 265 ntBASIC16.59■□□□□ 0.25
Pcdh15Q99PJ1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh15Q99PJ1 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh15Q99PJ1 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh15Q99PJ1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh15Q99PJ1 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh15Q99PJ1 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh15Q99PJ1 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh15Q99PJ1 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh15Q99PJ1 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh15Q99PJ1 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pcdh15Q99PJ1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pcdh15Q99PJ1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh15Q99PJ1 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pcdh15Q99PJ1 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh15Q99PJ1 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC16.58■□□□□ 0.25
Pcdh15Q99PJ1 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh15Q99PJ1 Gm15429-201ENSMUST00000151268 798 ntBASIC16.58■□□□□ 0.25
Pcdh15Q99PJ1 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC16.58■□□□□ 0.25
Pcdh15Q99PJ1 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.58■□□□□ 0.25
Pcdh15Q99PJ1 Gm27486-201ENSMUST00000184923 80 ntBASIC16.58■□□□□ 0.25
Pcdh15Q99PJ1 Gm4959-201ENSMUST00000197271 1044 ntBASIC16.58■□□□□ 0.25
Pcdh15Q99PJ1 Gm43118-201ENSMUST00000199149 775 ntBASIC16.58■□□□□ 0.25
Pcdh15Q99PJ1 Gm5425-201ENSMUST00000214125 459 ntBASIC16.58■□□□□ 0.25
Pcdh15Q99PJ1 Gm8598-201ENSMUST00000221184 836 ntBASIC16.58■□□□□ 0.25
Pcdh15Q99PJ1 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh15Q99PJ1 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Pcdh15Q99PJ1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh15Q99PJ1 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh15Q99PJ1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh15Q99PJ1 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh15Q99PJ1 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Pcdh15Q99PJ1 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms