Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Rnf111Q99ML9 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Rnf111Q99ML9 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
Rnf111Q99ML9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Rnf111Q99ML9 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Rnf111Q99ML9 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf111Q99ML9 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.52□□□□□ -0.09
Rnf111Q99ML9 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf111Q99ML9 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf111Q99ML9 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf111Q99ML9 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf111Q99ML9 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf111Q99ML9 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.52□□□□□ -0.09
Rnf111Q99ML9 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf111Q99ML9 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf111Q99ML9 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf111Q99ML9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf111Q99ML9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf111Q99ML9 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf111Q99ML9 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.51□□□□□ -0.09
Rnf111Q99ML9 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Rnf111Q99ML9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf111Q99ML9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf111Q99ML9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.51□□□□□ -0.09
Rnf111Q99ML9 Gm11452-201ENSMUST00000122376 690 ntBASIC14.51□□□□□ -0.09
Rnf111Q99ML9 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf111Q99ML9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Rnf111Q99ML9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.51□□□□□ -0.09
Rnf111Q99ML9 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.51□□□□□ -0.09
Rnf111Q99ML9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Rnf111Q99ML9 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf111Q99ML9 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Rnf111Q99ML9 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.51□□□□□ -0.09
Rnf111Q99ML9 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf111Q99ML9 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf111Q99ML9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf111Q99ML9 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf111Q99ML9 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf111Q99ML9 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf111Q99ML9 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf111Q99ML9 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf111Q99ML9 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Rnf111Q99ML9 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf111Q99ML9 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf111Q99ML9 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf111Q99ML9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf111Q99ML9 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf111Q99ML9 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf111Q99ML9 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf111Q99ML9 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.5□□□□□ -0.09
Rnf111Q99ML9 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf111Q99ML9 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf111Q99ML9 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Rnf111Q99ML9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.5□□□□□ -0.09
Rnf111Q99ML9 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Rnf111Q99ML9 Mir8098-201ENSMUST00000184011 137 ntBASIC14.5□□□□□ -0.09
Rnf111Q99ML9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.5□□□□□ -0.09
Rnf111Q99ML9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.5□□□□□ -0.09
Rnf111Q99ML9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf111Q99ML9 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.5□□□□□ -0.09
Rnf111Q99ML9 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.5□□□□□ -0.09
Rnf111Q99ML9 Gm7461-201ENSMUST00000058918 827 ntBASIC14.5□□□□□ -0.09
Rnf111Q99ML9 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Rnf111Q99ML9 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf111Q99ML9 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
Rnf111Q99ML9 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Rnf111Q99ML9 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf111Q99ML9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf111Q99ML9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Rnf111Q99ML9 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf111Q99ML9 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf111Q99ML9 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf111Q99ML9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.5□□□□□ -0.09
Rnf111Q99ML9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf111Q99ML9 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf111Q99ML9 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf111Q99ML9 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Rnf111Q99ML9 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf111Q99ML9 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf111Q99ML9 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf111Q99ML9 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf111Q99ML9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf111Q99ML9 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf111Q99ML9 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Rnf111Q99ML9 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Rnf111Q99ML9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf111Q99ML9 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Rnf111Q99ML9 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf111Q99ML9 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf111Q99ML9 Gm25990-201ENSMUST00000102440 86 ntBASIC14.49□□□□□ -0.09
Rnf111Q99ML9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf111Q99ML9 Gm15358-201ENSMUST00000119249 520 ntBASIC14.49□□□□□ -0.09
Rnf111Q99ML9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Rnf111Q99ML9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf111Q99ML9 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf111Q99ML9 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.49□□□□□ -0.09
Rnf111Q99ML9 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.49□□□□□ -0.09
Rnf111Q99ML9 Gm5864-201ENSMUST00000202263 970 ntBASIC14.49□□□□□ -0.09
Rnf111Q99ML9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.49□□□□□ -0.09
Rnf111Q99ML9 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms