Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkd1Q99MH6 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkd1Q99MH6 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkd1Q99MH6 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Nkd1Q99MH6 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nkd1Q99MH6 Gm17807-201ENSMUST00000186869 298 ntBASIC14.12□□□□□ -0.15
Nkd1Q99MH6 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Nkd1Q99MH6 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.12□□□□□ -0.15
Nkd1Q99MH6 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.12□□□□□ -0.15
Nkd1Q99MH6 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkd1Q99MH6 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nkd1Q99MH6 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkd1Q99MH6 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Nkd1Q99MH6 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkd1Q99MH6 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.12□□□□□ -0.15
Nkd1Q99MH6 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.12□□□□□ -0.15
Nkd1Q99MH6 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
Nkd1Q99MH6 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkd1Q99MH6 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkd1Q99MH6 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd1Q99MH6 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd1Q99MH6 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd1Q99MH6 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Nkd1Q99MH6 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.11□□□□□ -0.15
Nkd1Q99MH6 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd1Q99MH6 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd1Q99MH6 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd1Q99MH6 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd1Q99MH6 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.11□□□□□ -0.15
Nkd1Q99MH6 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Nkd1Q99MH6 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd1Q99MH6 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd1Q99MH6 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.11□□□□□ -0.15
Nkd1Q99MH6 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd1Q99MH6 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd1Q99MH6 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd1Q99MH6 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd1Q99MH6 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.11□□□□□ -0.15
Nkd1Q99MH6 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.11□□□□□ -0.15
Nkd1Q99MH6 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd1Q99MH6 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd1Q99MH6 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd1Q99MH6 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd1Q99MH6 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd1Q99MH6 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd1Q99MH6 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nkd1Q99MH6 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd1Q99MH6 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd1Q99MH6 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd1Q99MH6 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd1Q99MH6 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd1Q99MH6 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd1Q99MH6 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd1Q99MH6 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd1Q99MH6 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd1Q99MH6 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd1Q99MH6 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.1□□□□□ -0.15
Nkd1Q99MH6 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd1Q99MH6 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.1□□□□□ -0.15
Nkd1Q99MH6 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd1Q99MH6 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd1Q99MH6 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd1Q99MH6 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd1Q99MH6 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nkd1Q99MH6 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd1Q99MH6 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd1Q99MH6 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd1Q99MH6 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd1Q99MH6 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nkd1Q99MH6 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd1Q99MH6 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd1Q99MH6 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd1Q99MH6 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd1Q99MH6 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.09□□□□□ -0.15
Nkd1Q99MH6 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd1Q99MH6 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd1Q99MH6 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd1Q99MH6 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd1Q99MH6 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd1Q99MH6 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd1Q99MH6 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd1Q99MH6 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd1Q99MH6 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd1Q99MH6 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Nkd1Q99MH6 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd1Q99MH6 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.09□□□□□ -0.15
Nkd1Q99MH6 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nkd1Q99MH6 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd1Q99MH6 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd1Q99MH6 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nkd1Q99MH6 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd1Q99MH6 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd1Q99MH6 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd1Q99MH6 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.09□□□□□ -0.15
Nkd1Q99MH6 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd1Q99MH6 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd1Q99MH6 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd1Q99MH6 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.09□□□□□ -0.15
Nkd1Q99MH6 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.09□□□□□ -0.15
Nkd1Q99MH6 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms