Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm22065-201ENSMUST00000103753 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm22066-201ENSMUST00000103761 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm24932-201ENSMUST00000103763 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm24115-201ENSMUST00000103799 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm22190-201ENSMUST00000103827 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm22191-201ENSMUST00000103831 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm24721-201ENSMUST00000103849 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm28018-201ENSMUST00000103869 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm26399-201ENSMUST00000103937 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm13223-201ENSMUST00000118609 747 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm25349-201ENSMUST00000177728 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm23616-201ENSMUST00000177797 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm25871-201ENSMUST00000177816 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm24752-201ENSMUST00000178240 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm24496-201ENSMUST00000178287 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm25649-201ENSMUST00000178476 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm25548-201ENSMUST00000178681 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm23147-201ENSMUST00000178841 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm26095-201ENSMUST00000179270 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm22171-201ENSMUST00000179283 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm23936-201ENSMUST00000179354 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm22619-201ENSMUST00000179516 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm25255-201ENSMUST00000179579 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm24755-201ENSMUST00000179691 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm26506-201ENSMUST00000179692 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm25086-201ENSMUST00000179931 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm23243-201ENSMUST00000180047 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm24659-201ENSMUST00000180212 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm24169-201ENSMUST00000180244 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm23689-201ENSMUST00000180354 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm27359-201ENSMUST00000184153 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm27785-201ENSMUST00000184268 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm27466-201ENSMUST00000184396 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Gm27703-201ENSMUST00000184836 110 ntBASIC13.11□□□□□ -0.31
Scrt1Q99M85 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scrt1Q99M85 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scrt1Q99M85 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.1□□□□□ -0.31
Scrt1Q99M85 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.1□□□□□ -0.31
Scrt1Q99M85 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scrt1Q99M85 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.1□□□□□ -0.31
Scrt1Q99M85 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scrt1Q99M85 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scrt1Q99M85 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Scrt1Q99M85 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.1□□□□□ -0.31
Scrt1Q99M85 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Scrt1Q99M85 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Scrt1Q99M85 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scrt1Q99M85 Gm13823-201ENSMUST00000119930 345 ntBASIC13.1□□□□□ -0.31
Scrt1Q99M85 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Scrt1Q99M85 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scrt1Q99M85 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.1□□□□□ -0.31
Scrt1Q99M85 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.1□□□□□ -0.31
Scrt1Q99M85 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.1□□□□□ -0.31
Scrt1Q99M85 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scrt1Q99M85 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.1□□□□□ -0.31
Scrt1Q99M85 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scrt1Q99M85 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Scrt1Q99M85 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.1□□□□□ -0.31
Scrt1Q99M85 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scrt1Q99M85 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scrt1Q99M85 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scrt1Q99M85 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scrt1Q99M85 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scrt1Q99M85 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scrt1Q99M85 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.09□□□□□ -0.31
Scrt1Q99M85 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scrt1Q99M85 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scrt1Q99M85 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scrt1Q99M85 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scrt1Q99M85 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scrt1Q99M85 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Scrt1Q99M85 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scrt1Q99M85 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scrt1Q99M85 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.09□□□□□ -0.31
Scrt1Q99M85 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scrt1Q99M85 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scrt1Q99M85 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.09□□□□□ -0.31
Scrt1Q99M85 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.09□□□□□ -0.31
Scrt1Q99M85 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.09□□□□□ -0.31
Scrt1Q99M85 Gm18057-201ENSMUST00000208220 503 ntBASIC13.09□□□□□ -0.31
Scrt1Q99M85 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scrt1Q99M85 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.09□□□□□ -0.31
Scrt1Q99M85 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Scrt1Q99M85 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms