Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp1b1Q99LU0 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp1b1Q99LU0 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp1b1Q99LU0 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp1b1Q99LU0 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Chmp1b1Q99LU0 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp1b1Q99LU0 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp1b1Q99LU0 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp1b1Q99LU0 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp1b1Q99LU0 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp1b1Q99LU0 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Chmp1b1Q99LU0 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.15□□□□□ -0.14
Chmp1b1Q99LU0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp1b1Q99LU0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp1b1Q99LU0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Chmp1b1Q99LU0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.15□□□□□ -0.14
Chmp1b1Q99LU0 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.15□□□□□ -0.14
Chmp1b1Q99LU0 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Chmp1b1Q99LU0 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.15□□□□□ -0.14
Chmp1b1Q99LU0 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.15□□□□□ -0.14
Chmp1b1Q99LU0 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp1b1Q99LU0 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp1b1Q99LU0 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.15□□□□□ -0.14
Chmp1b1Q99LU0 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp1b1Q99LU0 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp1b1Q99LU0 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp1b1Q99LU0 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp1b1Q99LU0 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.15
Chmp1b1Q99LU0 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp1b1Q99LU0 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp1b1Q99LU0 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp1b1Q99LU0 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp1b1Q99LU0 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp1b1Q99LU0 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp1b1Q99LU0 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Chmp1b1Q99LU0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.14□□□□□ -0.15
Chmp1b1Q99LU0 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp1b1Q99LU0 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp1b1Q99LU0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.14□□□□□ -0.15
Chmp1b1Q99LU0 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp1b1Q99LU0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp1b1Q99LU0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp1b1Q99LU0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp1b1Q99LU0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Chmp1b1Q99LU0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp1b1Q99LU0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.14□□□□□ -0.15
Chmp1b1Q99LU0 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp1b1Q99LU0 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.14□□□□□ -0.15
Chmp1b1Q99LU0 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp1b1Q99LU0 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp1b1Q99LU0 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.14□□□□□ -0.15
Chmp1b1Q99LU0 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp1b1Q99LU0 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp1b1Q99LU0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.14□□□□□ -0.15
Chmp1b1Q99LU0 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Chmp1b1Q99LU0 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp1b1Q99LU0 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp1b1Q99LU0 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.13□□□□□ -0.15
Chmp1b1Q99LU0 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp1b1Q99LU0 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Chmp1b1Q99LU0 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp1b1Q99LU0 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Chmp1b1Q99LU0 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp1b1Q99LU0 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp1b1Q99LU0 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp1b1Q99LU0 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp1b1Q99LU0 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp1b1Q99LU0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp1b1Q99LU0 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp1b1Q99LU0 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.13□□□□□ -0.15
Chmp1b1Q99LU0 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp1b1Q99LU0 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.13□□□□□ -0.15
Chmp1b1Q99LU0 Gm7862-201ENSMUST00000121461 292 ntBASIC14.13□□□□□ -0.15
Chmp1b1Q99LU0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp1b1Q99LU0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.13□□□□□ -0.15
Chmp1b1Q99LU0 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Chmp1b1Q99LU0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp1b1Q99LU0 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp1b1Q99LU0 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.13□□□□□ -0.15
Chmp1b1Q99LU0 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Chmp1b1Q99LU0 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp1b1Q99LU0 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp1b1Q99LU0 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp1b1Q99LU0 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp1b1Q99LU0 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp1b1Q99LU0 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp1b1Q99LU0 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp1b1Q99LU0 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms