Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdk9Q99J95 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Cdk9Q99J95 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdk9Q99J95 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdk9Q99J95 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdk9Q99J95 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdk9Q99J95 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdk9Q99J95 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cdk9Q99J95 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdk9Q99J95 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Cdk9Q99J95 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.09■□□□□ 0.01
Cdk9Q99J95 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdk9Q99J95 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.09■□□□□ 0.01
Cdk9Q99J95 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdk9Q99J95 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cdk9Q99J95 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Cdk9Q99J95 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cdk9Q99J95 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cdk9Q99J95 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cdk9Q99J95 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cdk9Q99J95 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdk9Q99J95 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cdk9Q99J95 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cdk9Q99J95 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdk9Q99J95 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cdk9Q99J95 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdk9Q99J95 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdk9Q99J95 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cdk9Q99J95 Gm14859-201ENSMUST00000117752 357 ntBASIC15.08■□□□□ 0
Cdk9Q99J95 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cdk9Q99J95 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.08■□□□□ 0
Cdk9Q99J95 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Cdk9Q99J95 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Cdk9Q99J95 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdk9Q99J95 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdk9Q99J95 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdk9Q99J95 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Cdk9Q99J95 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Cdk9Q99J95 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdk9Q99J95 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Cdk9Q99J95 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Cdk9Q99J95 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.07■□□□□ 0
Cdk9Q99J95 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cdk9Q99J95 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Cdk9Q99J95 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cdk9Q99J95 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdk9Q99J95 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cdk9Q99J95 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.07■□□□□ 0
Cdk9Q99J95 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.07■□□□□ 0
Cdk9Q99J95 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cdk9Q99J95 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdk9Q99J95 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
Cdk9Q99J95 Gm25406-201ENSMUST00000157599 105 ntBASIC15.07■□□□□ 0
Cdk9Q99J95 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.07■□□□□ 0
Cdk9Q99J95 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdk9Q99J95 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.07■□□□□ 0
Cdk9Q99J95 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cdk9Q99J95 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cdk9Q99J95 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cdk9Q99J95 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Cdk9Q99J95 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Cdk9Q99J95 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdk9Q99J95 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdk9Q99J95 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdk9Q99J95 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdk9Q99J95 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdk9Q99J95 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdk9Q99J95 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdk9Q99J95 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Cdk9Q99J95 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.06■□□□□ 0
Cdk9Q99J95 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdk9Q99J95 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Cdk9Q99J95 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.06■□□□□ 0
Cdk9Q99J95 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cdk9Q99J95 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdk9Q99J95 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdk9Q99J95 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cdk9Q99J95 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cdk9Q99J95 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cdk9Q99J95 Gm11950-201ENSMUST00000121615 838 ntBASIC15.06■□□□□ 0
Cdk9Q99J95 Gm7284-201ENSMUST00000131667 944 ntBASIC15.06■□□□□ 0
Cdk9Q99J95 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cdk9Q99J95 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.06■□□□□ 0
Cdk9Q99J95 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cdk9Q99J95 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.06■□□□□ 0
Cdk9Q99J95 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdk9Q99J95 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdk9Q99J95 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cdk9Q99J95 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdk9Q99J95 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cdk9Q99J95 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdk9Q99J95 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdk9Q99J95 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cdk9Q99J95 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cdk9Q99J95 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.06■□□□□ 0
Cdk9Q99J95 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cdk9Q99J95 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cdk9Q99J95 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.05■□□□□ 0
Cdk9Q99J95 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cdk9Q99J95 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms