Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1aQ921W0 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1aQ921W0 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1aQ921W0 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1aQ921W0 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Chmp1aQ921W0 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1aQ921W0 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1aQ921W0 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1aQ921W0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1aQ921W0 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.22□□□□□ -0.29
Chmp1aQ921W0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1aQ921W0 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1aQ921W0 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1aQ921W0 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1aQ921W0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Chmp1aQ921W0 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1aQ921W0 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1aQ921W0 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1aQ921W0 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1aQ921W0 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1aQ921W0 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1aQ921W0 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1aQ921W0 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Chmp1aQ921W0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1aQ921W0 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1aQ921W0 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1aQ921W0 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1aQ921W0 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1aQ921W0 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1aQ921W0 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1aQ921W0 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1aQ921W0 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1aQ921W0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.21□□□□□ -0.29
Chmp1aQ921W0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Chmp1aQ921W0 Gm9013-201ENSMUST00000132939 882 ntBASIC13.21□□□□□ -0.29
Chmp1aQ921W0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC13.21□□□□□ -0.29
Chmp1aQ921W0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1aQ921W0 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1aQ921W0 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1aQ921W0 Gm19164-201ENSMUST00000210667 640 ntBASIC13.21□□□□□ -0.29
Chmp1aQ921W0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.21□□□□□ -0.29
Chmp1aQ921W0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Chmp1aQ921W0 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1aQ921W0 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.21□□□□□ -0.29
Chmp1aQ921W0 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1aQ921W0 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp1aQ921W0 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp1aQ921W0 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp1aQ921W0 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp1aQ921W0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.21□□□□□ -0.3
Chmp1aQ921W0 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp1aQ921W0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Rubie-203ENSMUST00000227803 2430 ntBASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Gm18032-201ENSMUST00000222541 538 ntBASIC13.2□□□□□ -0.3
Chmp1aQ921W0 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1aQ921W0 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms