Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc1bQ920F6 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc1bQ920F6 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc1bQ920F6 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.26■□□□□ 0.35
Smc1bQ920F6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc1bQ920F6 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1bQ920F6 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1bQ920F6 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1bQ920F6 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1bQ920F6 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1bQ920F6 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1bQ920F6 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1bQ920F6 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Smc1bQ920F6 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1bQ920F6 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1bQ920F6 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1bQ920F6 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.25■□□□□ 0.35
Smc1bQ920F6 Gm27437-201ENSMUST00000183429 107 ntBASIC17.25■□□□□ 0.35
Smc1bQ920F6 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1bQ920F6 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1bQ920F6 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1bQ920F6 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1bQ920F6 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.25■□□□□ 0.35
Smc1bQ920F6 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1bQ920F6 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1bQ920F6 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1bQ920F6 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.25■□□□□ 0.35
Smc1bQ920F6 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1bQ920F6 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.25■□□□□ 0.35
Smc1bQ920F6 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1bQ920F6 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1bQ920F6 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1bQ920F6 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1bQ920F6 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1bQ920F6 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Smc1bQ920F6 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1bQ920F6 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1bQ920F6 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.24■□□□□ 0.35
Smc1bQ920F6 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1bQ920F6 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1bQ920F6 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1bQ920F6 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.24■□□□□ 0.35
Smc1bQ920F6 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Smc1bQ920F6 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1bQ920F6 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.24■□□□□ 0.35
Smc1bQ920F6 Gm10253-201ENSMUST00000194270 940 ntBASIC17.24■□□□□ 0.35
Smc1bQ920F6 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1bQ920F6 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1bQ920F6 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Smc1bQ920F6 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.24■□□□□ 0.35
Smc1bQ920F6 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1bQ920F6 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Smc1bQ920F6 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1bQ920F6 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1bQ920F6 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1bQ920F6 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1bQ920F6 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.24■□□□□ 0.35
Smc1bQ920F6 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1bQ920F6 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1bQ920F6 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.24■□□□□ 0.35
Smc1bQ920F6 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1bQ920F6 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1bQ920F6 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smc1bQ920F6 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Smc1bQ920F6 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smc1bQ920F6 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Smc1bQ920F6 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smc1bQ920F6 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.23■□□□□ 0.35
Smc1bQ920F6 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smc1bQ920F6 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smc1bQ920F6 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Smc1bQ920F6 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.23■□□□□ 0.35
Smc1bQ920F6 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Smc1bQ920F6 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smc1bQ920F6 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Smc1bQ920F6 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smc1bQ920F6 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smc1bQ920F6 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smc1bQ920F6 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Smc1bQ920F6 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Smc1bQ920F6 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smc1bQ920F6 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smc1bQ920F6 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smc1bQ920F6 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc1bQ920F6 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.22■□□□□ 0.35
Smc1bQ920F6 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc1bQ920F6 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc1bQ920F6 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smc1bQ920F6 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Smc1bQ920F6 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc1bQ920F6 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Smc1bQ920F6 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Smc1bQ920F6 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.22■□□□□ 0.35
Smc1bQ920F6 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc1bQ920F6 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc1bQ920F6 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Smc1bQ920F6 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Smc1bQ920F6 Gm22065-201ENSMUST00000103753 110 ntBASIC17.22■□□□□ 0.35
Smc1bQ920F6 Gm22066-201ENSMUST00000103761 110 ntBASIC17.22■□□□□ 0.35
Smc1bQ920F6 Gm24932-201ENSMUST00000103763 110 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms