Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha11Q91Y19 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha11Q91Y19 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha11Q91Y19 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.71■□□□□ 0.1
Pcdha11Q91Y19 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdha11Q91Y19 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Gm11745-201ENSMUST00000121669 448 ntBASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Gm16026-204ENSMUST00000162652 683 ntBASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha11Q91Y19 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdha11Q91Y19 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdha11Q91Y19 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdha11Q91Y19 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdha11Q91Y19 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdha11Q91Y19 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdha11Q91Y19 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdha11Q91Y19 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdha11Q91Y19 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdha11Q91Y19 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdha11Q91Y19 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdha11Q91Y19 BC037039-201ENSMUST00000192003 2205 ntBASIC15.69■□□□□ 0.1
Pcdha11Q91Y19 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdha11Q91Y19 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdha11Q91Y19 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdha11Q91Y19 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdha11Q91Y19 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdha11Q91Y19 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdha11Q91Y19 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pcdha11Q91Y19 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdha11Q91Y19 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdha11Q91Y19 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdha11Q91Y19 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pcdha11Q91Y19 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Rprl2-201ENSMUST00000157150 290 ntBASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha11Q91Y19 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms