Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha3Q91Y16 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pcdha3Q91Y16 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Pcdha3Q91Y16 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha3Q91Y16 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha3Q91Y16 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha3Q91Y16 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.63■□□□□ 0.09
Pcdha3Q91Y16 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha3Q91Y16 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Pcdha3Q91Y16 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha3Q91Y16 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha3Q91Y16 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha3Q91Y16 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha3Q91Y16 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha3Q91Y16 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha3Q91Y16 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.61■□□□□ 0.09
Pcdha3Q91Y16 Mir3113-201ENSMUST00000175478 76 ntBASIC15.61■□□□□ 0.09
Pcdha3Q91Y16 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdha3Q91Y16 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha3Q91Y16 Gm2213-201ENSMUST00000197485 688 ntBASIC15.61■□□□□ 0.09
Pcdha3Q91Y16 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha3Q91Y16 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha3Q91Y16 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha3Q91Y16 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha3Q91Y16 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha3Q91Y16 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha3Q91Y16 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha3Q91Y16 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha3Q91Y16 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha3Q91Y16 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha3Q91Y16 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha3Q91Y16 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha3Q91Y16 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha3Q91Y16 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha3Q91Y16 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pcdha3Q91Y16 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha3Q91Y16 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdha3Q91Y16 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha3Q91Y16 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdha3Q91Y16 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha3Q91Y16 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdha3Q91Y16 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.6■□□□□ 0.09
Pcdha3Q91Y16 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha3Q91Y16 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Pcdha3Q91Y16 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha3Q91Y16 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha3Q91Y16 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha3Q91Y16 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha3Q91Y16 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdha3Q91Y16 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha3Q91Y16 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pcdha3Q91Y16 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.6■□□□□ 0.09
Pcdha3Q91Y16 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdha3Q91Y16 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha3Q91Y16 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Pcdha3Q91Y16 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha3Q91Y16 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.6■□□□□ 0.09
Pcdha3Q91Y16 Gm14494-201ENSMUST00000118786 435 ntBASIC15.6■□□□□ 0.09
Pcdha3Q91Y16 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.6■□□□□ 0.09
Pcdha3Q91Y16 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pcdha3Q91Y16 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha3Q91Y16 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms