Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb20Q91XZ9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb20Q91XZ9 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb20Q91XZ9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb20Q91XZ9 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.59□□□□□ -0.07
Pcdhb20Q91XZ9 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb20Q91XZ9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb20Q91XZ9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhb20Q91XZ9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.59□□□□□ -0.07
Pcdhb20Q91XZ9 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb20Q91XZ9 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb20Q91XZ9 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb20Q91XZ9 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhb20Q91XZ9 Gm21139-201ENSMUST00000186594 877 ntBASIC14.59□□□□□ -0.07
Pcdhb20Q91XZ9 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.59□□□□□ -0.07
Pcdhb20Q91XZ9 Gm2756-201ENSMUST00000195851 400 ntBASIC14.59□□□□□ -0.07
Pcdhb20Q91XZ9 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC14.59□□□□□ -0.07
Pcdhb20Q91XZ9 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb20Q91XZ9 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.59□□□□□ -0.07
Pcdhb20Q91XZ9 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.59□□□□□ -0.07
Pcdhb20Q91XZ9 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.59□□□□□ -0.07
Pcdhb20Q91XZ9 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb20Q91XZ9 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb20Q91XZ9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb20Q91XZ9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb20Q91XZ9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb20Q91XZ9 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb20Q91XZ9 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb20Q91XZ9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb20Q91XZ9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb20Q91XZ9 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb20Q91XZ9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb20Q91XZ9 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb20Q91XZ9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb20Q91XZ9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb20Q91XZ9 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdhb20Q91XZ9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb20Q91XZ9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb20Q91XZ9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb20Q91XZ9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb20Q91XZ9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb20Q91XZ9 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb20Q91XZ9 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Pcdhb20Q91XZ9 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb20Q91XZ9 Gm13597-201ENSMUST00000121239 375 ntBASIC14.58□□□□□ -0.08
Pcdhb20Q91XZ9 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb20Q91XZ9 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdhb20Q91XZ9 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.58□□□□□ -0.08
Pcdhb20Q91XZ9 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdhb20Q91XZ9 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdhb20Q91XZ9 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.58□□□□□ -0.08
Pcdhb20Q91XZ9 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb20Q91XZ9 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Pcdhb20Q91XZ9 Gm10175-201ENSMUST00000086013 645 ntBASIC14.58□□□□□ -0.08
Pcdhb20Q91XZ9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb20Q91XZ9 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb20Q91XZ9 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb20Q91XZ9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Pcdhb20Q91XZ9 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb20Q91XZ9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb20Q91XZ9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdhb20Q91XZ9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb20Q91XZ9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb20Q91XZ9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhb20Q91XZ9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb20Q91XZ9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhb20Q91XZ9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb20Q91XZ9 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb20Q91XZ9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Pcdhb20Q91XZ9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb20Q91XZ9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb20Q91XZ9 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb20Q91XZ9 Gm12008-201ENSMUST00000117791 755 ntBASIC14.57□□□□□ -0.08
Pcdhb20Q91XZ9 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.57□□□□□ -0.08
Pcdhb20Q91XZ9 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb20Q91XZ9 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb20Q91XZ9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdhb20Q91XZ9 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb20Q91XZ9 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb20Q91XZ9 Gm37631-201ENSMUST00000192275 364 ntBASIC14.57□□□□□ -0.08
Pcdhb20Q91XZ9 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.57□□□□□ -0.08
Pcdhb20Q91XZ9 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb20Q91XZ9 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb20Q91XZ9 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb20Q91XZ9 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Pcdhb20Q91XZ9 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb20Q91XZ9 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhb20Q91XZ9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb20Q91XZ9 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb20Q91XZ9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb20Q91XZ9 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC14.57□□□□□ -0.08
Pcdhb20Q91XZ9 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdhb20Q91XZ9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb20Q91XZ9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms