Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ddx41Q91VN6 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.16■□□□□ 0.34
Ddx41Q91VN6 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx41Q91VN6 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx41Q91VN6 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx41Q91VN6 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx41Q91VN6 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.16■□□□□ 0.34
Ddx41Q91VN6 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx41Q91VN6 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx41Q91VN6 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx41Q91VN6 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.16■□□□□ 0.34
Ddx41Q91VN6 Gm8318-201ENSMUST00000182954 872 ntBASIC17.16■□□□□ 0.34
Ddx41Q91VN6 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.16■□□□□ 0.34
Ddx41Q91VN6 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx41Q91VN6 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ddx41Q91VN6 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx41Q91VN6 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx41Q91VN6 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx41Q91VN6 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.16■□□□□ 0.34
Ddx41Q91VN6 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx41Q91VN6 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx41Q91VN6 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ddx41Q91VN6 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx41Q91VN6 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx41Q91VN6 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Ddx41Q91VN6 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx41Q91VN6 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx41Q91VN6 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx41Q91VN6 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Ddx41Q91VN6 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx41Q91VN6 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx41Q91VN6 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.15■□□□□ 0.34
Ddx41Q91VN6 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx41Q91VN6 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx41Q91VN6 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx41Q91VN6 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx41Q91VN6 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx41Q91VN6 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx41Q91VN6 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Ddx41Q91VN6 Gm14722-201ENSMUST00000118943 689 ntBASIC17.15■□□□□ 0.34
Ddx41Q91VN6 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ddx41Q91VN6 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.15■□□□□ 0.34
Ddx41Q91VN6 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.15■□□□□ 0.34
Ddx41Q91VN6 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx41Q91VN6 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx41Q91VN6 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx41Q91VN6 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Ddx41Q91VN6 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx41Q91VN6 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx41Q91VN6 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ddx41Q91VN6 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx41Q91VN6 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx41Q91VN6 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ddx41Q91VN6 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx41Q91VN6 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx41Q91VN6 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx41Q91VN6 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx41Q91VN6 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx41Q91VN6 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx41Q91VN6 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.14■□□□□ 0.33
Ddx41Q91VN6 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx41Q91VN6 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx41Q91VN6 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx41Q91VN6 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx41Q91VN6 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx41Q91VN6 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx41Q91VN6 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ddx41Q91VN6 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Ddx41Q91VN6 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.14■□□□□ 0.33
Ddx41Q91VN6 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx41Q91VN6 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx41Q91VN6 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ddx41Q91VN6 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx41Q91VN6 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.14■□□□□ 0.33
Ddx41Q91VN6 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.14■□□□□ 0.33
Ddx41Q91VN6 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx41Q91VN6 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx41Q91VN6 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx41Q91VN6 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx41Q91VN6 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.14■□□□□ 0.33
Ddx41Q91VN6 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx41Q91VN6 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx41Q91VN6 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx41Q91VN6 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ddx41Q91VN6 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx41Q91VN6 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx41Q91VN6 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx41Q91VN6 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ddx41Q91VN6 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx41Q91VN6 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx41Q91VN6 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx41Q91VN6 Gm43399-201ENSMUST00000202546 2374 ntBASIC17.13■□□□□ 0.33
Ddx41Q91VN6 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx41Q91VN6 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx41Q91VN6 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.13■□□□□ 0.33
Ddx41Q91VN6 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.13■□□□□ 0.33
Ddx41Q91VN6 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx41Q91VN6 Gm27301-201ENSMUST00000184012 127 ntBASIC17.13■□□□□ 0.33
Ddx41Q91VN6 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.13■□□□□ 0.33
Ddx41Q91VN6 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms