Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vsx1Q91V10 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vsx1Q91V10 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.78□□□□□ -0.04
Vsx1Q91V10 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Vsx1Q91V10 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.78□□□□□ -0.04
Vsx1Q91V10 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vsx1Q91V10 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vsx1Q91V10 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vsx1Q91V10 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vsx1Q91V10 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vsx1Q91V10 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vsx1Q91V10 Gm38225-201ENSMUST00000194001 393 ntBASIC14.78□□□□□ -0.04
Vsx1Q91V10 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.78□□□□□ -0.04
Vsx1Q91V10 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vsx1Q91V10 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.78□□□□□ -0.04
Vsx1Q91V10 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vsx1Q91V10 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vsx1Q91V10 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Vsx1Q91V10 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vsx1Q91V10 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vsx1Q91V10 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Vsx1Q91V10 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vsx1Q91V10 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vsx1Q91V10 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vsx1Q91V10 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.77□□□□□ -0.04
Vsx1Q91V10 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.04
Vsx1Q91V10 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Vsx1Q91V10 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vsx1Q91V10 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.77□□□□□ -0.04
Vsx1Q91V10 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vsx1Q91V10 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Vsx1Q91V10 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vsx1Q91V10 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vsx1Q91V10 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vsx1Q91V10 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Vsx1Q91V10 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.77□□□□□ -0.05
Vsx1Q91V10 Gm25144-201ENSMUST00000179561 110 ntBASIC14.77□□□□□ -0.05
Vsx1Q91V10 Gm25352-201ENSMUST00000179815 110 ntBASIC14.77□□□□□ -0.05
Vsx1Q91V10 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.77□□□□□ -0.05
Vsx1Q91V10 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.77□□□□□ -0.05
Vsx1Q91V10 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vsx1Q91V10 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vsx1Q91V10 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.77□□□□□ -0.05
Vsx1Q91V10 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vsx1Q91V10 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vsx1Q91V10 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vsx1Q91V10 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vsx1Q91V10 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vsx1Q91V10 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vsx1Q91V10 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vsx1Q91V10 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vsx1Q91V10 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.76□□□□□ -0.05
Vsx1Q91V10 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vsx1Q91V10 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.76□□□□□ -0.05
Vsx1Q91V10 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.76□□□□□ -0.05
Vsx1Q91V10 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.76□□□□□ -0.05
Vsx1Q91V10 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vsx1Q91V10 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vsx1Q91V10 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Vsx1Q91V10 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vsx1Q91V10 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Vsx1Q91V10 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vsx1Q91V10 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vsx1Q91V10 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vsx1Q91V10 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.76□□□□□ -0.05
Vsx1Q91V10 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vsx1Q91V10 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vsx1Q91V10 Gm6912-201ENSMUST00000117218 544 ntBASIC14.76□□□□□ -0.05
Vsx1Q91V10 Gm11543-201ENSMUST00000120758 370 ntBASIC14.76□□□□□ -0.05
Vsx1Q91V10 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.76□□□□□ -0.05
Vsx1Q91V10 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vsx1Q91V10 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vsx1Q91V10 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.76□□□□□ -0.05
Vsx1Q91V10 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Vsx1Q91V10 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vsx1Q91V10 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vsx1Q91V10 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vsx1Q91V10 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vsx1Q91V10 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vsx1Q91V10 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vsx1Q91V10 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Vsx1Q91V10 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vsx1Q91V10 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vsx1Q91V10 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vsx1Q91V10 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vsx1Q91V10 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vsx1Q91V10 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vsx1Q91V10 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vsx1Q91V10 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vsx1Q91V10 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.75□□□□□ -0.05
Vsx1Q91V10 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vsx1Q91V10 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vsx1Q91V10 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vsx1Q91V10 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Vsx1Q91V10 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.75□□□□□ -0.05
Vsx1Q91V10 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vsx1Q91V10 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.75□□□□□ -0.05
Vsx1Q91V10 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.75□□□□□ -0.05
Vsx1Q91V10 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vsx1Q91V10 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 7.5 ms