Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tram1Q91V04 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tram1Q91V04 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tram1Q91V04 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tram1Q91V04 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tram1Q91V04 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tram1Q91V04 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tram1Q91V04 Gm9172-201ENSMUST00000212092 954 ntBASIC12.88□□□□□ -0.35
Tram1Q91V04 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tram1Q91V04 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tram1Q91V04 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tram1Q91V04 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tram1Q91V04 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tram1Q91V04 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tram1Q91V04 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tram1Q91V04 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Tram1Q91V04 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tram1Q91V04 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.88□□□□□ -0.35
Tram1Q91V04 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tram1Q91V04 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tram1Q91V04 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tram1Q91V04 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tram1Q91V04 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tram1Q91V04 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tram1Q91V04 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tram1Q91V04 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tram1Q91V04 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tram1Q91V04 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tram1Q91V04 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tram1Q91V04 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tram1Q91V04 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Tram1Q91V04 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tram1Q91V04 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tram1Q91V04 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tram1Q91V04 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tram1Q91V04 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tram1Q91V04 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tram1Q91V04 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tram1Q91V04 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tram1Q91V04 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.87□□□□□ -0.35
Tram1Q91V04 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.87□□□□□ -0.35
Tram1Q91V04 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tram1Q91V04 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.87□□□□□ -0.35
Tram1Q91V04 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.87□□□□□ -0.35
Tram1Q91V04 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.87□□□□□ -0.35
Tram1Q91V04 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.87□□□□□ -0.35
Tram1Q91V04 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tram1Q91V04 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
Tram1Q91V04 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tram1Q91V04 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tram1Q91V04 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tram1Q91V04 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.87□□□□□ -0.35
Tram1Q91V04 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tram1Q91V04 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tram1Q91V04 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.87□□□□□ -0.35
Tram1Q91V04 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tram1Q91V04 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Tram1Q91V04 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tram1Q91V04 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tram1Q91V04 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tram1Q91V04 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tram1Q91V04 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tram1Q91V04 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tram1Q91V04 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.87□□□□□ -0.35
Tram1Q91V04 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tram1Q91V04 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Tram1Q91V04 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Tram1Q91V04 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tram1Q91V04 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.86□□□□□ -0.35
Tram1Q91V04 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tram1Q91V04 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tram1Q91V04 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tram1Q91V04 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tram1Q91V04 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tram1Q91V04 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tram1Q91V04 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tram1Q91V04 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tram1Q91V04 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tram1Q91V04 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tram1Q91V04 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tram1Q91V04 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tram1Q91V04 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Tram1Q91V04 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tram1Q91V04 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tram1Q91V04 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.86□□□□□ -0.35
Tram1Q91V04 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.86□□□□□ -0.35
Tram1Q91V04 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC12.86□□□□□ -0.35
Tram1Q91V04 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tram1Q91V04 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tram1Q91V04 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.86□□□□□ -0.35
Tram1Q91V04 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Tram1Q91V04 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tram1Q91V04 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tram1Q91V04 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tram1Q91V04 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tram1Q91V04 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tram1Q91V04 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tram1Q91V04 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Tram1Q91V04 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tram1Q91V04 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms