Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rab40cQ8VHQ4 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Gm6623-201ENSMUST00000173570 544 ntBASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rab40cQ8VHQ4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Gm13312-201ENSMUST00000119631 718 ntBASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Gm13836-201ENSMUST00000121159 501 ntBASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rab40cQ8VHQ4 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rab40cQ8VHQ4 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Rab40cQ8VHQ4 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rab40cQ8VHQ4 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Rab40cQ8VHQ4 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Rab40cQ8VHQ4 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rab40cQ8VHQ4 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rab40cQ8VHQ4 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Rab40cQ8VHQ4 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rab40cQ8VHQ4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rab40cQ8VHQ4 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rab40cQ8VHQ4 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rab40cQ8VHQ4 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rab40cQ8VHQ4 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rab40cQ8VHQ4 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.21□□□□□ -0.45
Rab40cQ8VHQ4 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms