Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa1Q8VEE4 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rpa1Q8VEE4 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rpa1Q8VEE4 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa1Q8VEE4 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa1Q8VEE4 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa1Q8VEE4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpa1Q8VEE4 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rpa1Q8VEE4 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpa1Q8VEE4 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rpa1Q8VEE4 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpa1Q8VEE4 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpa1Q8VEE4 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpa1Q8VEE4 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpa1Q8VEE4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpa1Q8VEE4 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.09■□□□□ 0.01
Rpa1Q8VEE4 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.09■□□□□ 0.01
Rpa1Q8VEE4 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpa1Q8VEE4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rpa1Q8VEE4 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.09■□□□□ 0.01
Rpa1Q8VEE4 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rpa1Q8VEE4 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpa1Q8VEE4 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpa1Q8VEE4 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpa1Q8VEE4 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.09■□□□□ 0.01
Rpa1Q8VEE4 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpa1Q8VEE4 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpa1Q8VEE4 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpa1Q8VEE4 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.09■□□□□ 0.01
Rpa1Q8VEE4 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpa1Q8VEE4 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpa1Q8VEE4 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpa1Q8VEE4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rpa1Q8VEE4 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpa1Q8VEE4 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpa1Q8VEE4 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rpa1Q8VEE4 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rpa1Q8VEE4 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rpa1Q8VEE4 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rpa1Q8VEE4 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Rpa1Q8VEE4 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rpa1Q8VEE4 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rpa1Q8VEE4 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Rpa1Q8VEE4 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Rpa1Q8VEE4 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rpa1Q8VEE4 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpa1Q8VEE4 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpa1Q8VEE4 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rpa1Q8VEE4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rpa1Q8VEE4 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.08■□□□□ 0
Rpa1Q8VEE4 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpa1Q8VEE4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.08■□□□□ 0
Rpa1Q8VEE4 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rpa1Q8VEE4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpa1Q8VEE4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.08■□□□□ 0
Rpa1Q8VEE4 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.08■□□□□ 0
Rpa1Q8VEE4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpa1Q8VEE4 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Rpa1Q8VEE4 Grk6-207ENSMUST00000225925 2769 ntBASIC15.08■□□□□ 0
Rpa1Q8VEE4 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.08■□□□□ 0
Rpa1Q8VEE4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpa1Q8VEE4 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Rpa1Q8VEE4 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rpa1Q8VEE4 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Rpa1Q8VEE4 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rpa1Q8VEE4 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rpa1Q8VEE4 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Rpa1Q8VEE4 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Rpa1Q8VEE4 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpa1Q8VEE4 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpa1Q8VEE4 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rpa1Q8VEE4 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpa1Q8VEE4 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rpa1Q8VEE4 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpa1Q8VEE4 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rpa1Q8VEE4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpa1Q8VEE4 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpa1Q8VEE4 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpa1Q8VEE4 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rpa1Q8VEE4 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpa1Q8VEE4 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpa1Q8VEE4 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.07■□□□□ 0
Rpa1Q8VEE4 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rpa1Q8VEE4 Gm6623-201ENSMUST00000173570 544 ntBASIC15.07■□□□□ 0
Rpa1Q8VEE4 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.07■□□□□ 0
Rpa1Q8VEE4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.07■□□□□ 0
Rpa1Q8VEE4 Gm19164-201ENSMUST00000210667 640 ntBASIC15.07■□□□□ 0
Rpa1Q8VEE4 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpa1Q8VEE4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpa1Q8VEE4 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpa1Q8VEE4 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.07■□□□□ 0
Rpa1Q8VEE4 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpa1Q8VEE4 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpa1Q8VEE4 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpa1Q8VEE4 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rpa1Q8VEE4 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rpa1Q8VEE4 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpa1Q8VEE4 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rpa1Q8VEE4 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Rpa1Q8VEE4 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms