Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkd2Q8VE28 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkd2Q8VE28 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkd2Q8VE28 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkd2Q8VE28 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkd2Q8VE28 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkd2Q8VE28 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkd2Q8VE28 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkd2Q8VE28 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkd2Q8VE28 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkd2Q8VE28 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkd2Q8VE28 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Gm11025-201ENSMUST00000140773 466 ntBASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd2Q8VE28 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Nkd2Q8VE28 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Nkd2Q8VE28 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd2Q8VE28 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd2Q8VE28 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nkd2Q8VE28 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.65□□□□□ -0.22
Nkd2Q8VE28 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd2Q8VE28 Gm15920-201ENSMUST00000118998 402 ntBASIC13.65□□□□□ -0.22
Nkd2Q8VE28 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd2Q8VE28 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd2Q8VE28 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd2Q8VE28 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.65□□□□□ -0.22
Nkd2Q8VE28 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.65□□□□□ -0.22
Nkd2Q8VE28 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nkd2Q8VE28 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.65□□□□□ -0.22
Nkd2Q8VE28 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.65□□□□□ -0.22
Nkd2Q8VE28 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd2Q8VE28 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Nkd2Q8VE28 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd2Q8VE28 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nkd2Q8VE28 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd2Q8VE28 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd2Q8VE28 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd2Q8VE28 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd2Q8VE28 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd2Q8VE28 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd2Q8VE28 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd2Q8VE28 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Nkd2Q8VE28 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.64□□□□□ -0.23
Nkd2Q8VE28 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd2Q8VE28 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd2Q8VE28 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Nkd2Q8VE28 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd2Q8VE28 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd2Q8VE28 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd2Q8VE28 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Nkd2Q8VE28 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd2Q8VE28 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd2Q8VE28 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd2Q8VE28 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd2Q8VE28 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd2Q8VE28 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd2Q8VE28 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.64□□□□□ -0.23
Nkd2Q8VE28 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd2Q8VE28 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd2Q8VE28 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd2Q8VE28 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.64□□□□□ -0.23
Nkd2Q8VE28 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd2Q8VE28 Gm5682-201ENSMUST00000173402 505 ntBASIC13.64□□□□□ -0.23
Nkd2Q8VE28 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.64□□□□□ -0.23
Nkd2Q8VE28 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd2Q8VE28 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.64□□□□□ -0.23
Nkd2Q8VE28 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd2Q8VE28 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms