Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup35Q8R4R6 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup35Q8R4R6 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.21□□□□□ -0.45
Nup35Q8R4R6 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.21□□□□□ -0.45
Nup35Q8R4R6 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.21□□□□□ -0.45
Nup35Q8R4R6 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup35Q8R4R6 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup35Q8R4R6 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup35Q8R4R6 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Nup35Q8R4R6 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup35Q8R4R6 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Nup35Q8R4R6 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nup35Q8R4R6 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nup35Q8R4R6 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nup35Q8R4R6 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nup35Q8R4R6 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nup35Q8R4R6 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.21□□□□□ -0.46
Nup35Q8R4R6 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
Nup35Q8R4R6 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nup35Q8R4R6 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nup35Q8R4R6 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nup35Q8R4R6 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nup35Q8R4R6 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup35Q8R4R6 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup35Q8R4R6 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.2□□□□□ -0.46
Nup35Q8R4R6 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup35Q8R4R6 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nup35Q8R4R6 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nup35Q8R4R6 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup35Q8R4R6 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Nup35Q8R4R6 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup35Q8R4R6 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup35Q8R4R6 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup35Q8R4R6 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Nup35Q8R4R6 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Nup35Q8R4R6 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup35Q8R4R6 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.2□□□□□ -0.46
Nup35Q8R4R6 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Nup35Q8R4R6 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Nup35Q8R4R6 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup35Q8R4R6 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nup35Q8R4R6 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Nup35Q8R4R6 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup35Q8R4R6 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup35Q8R4R6 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup35Q8R4R6 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup35Q8R4R6 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Nup35Q8R4R6 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup35Q8R4R6 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup35Q8R4R6 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.2□□□□□ -0.46
Nup35Q8R4R6 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup35Q8R4R6 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nup35Q8R4R6 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.2□□□□□ -0.46
Nup35Q8R4R6 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup35Q8R4R6 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nup35Q8R4R6 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Gm17808-201ENSMUST00000200859 894 ntBASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.19□□□□□ -0.46
Nup35Q8R4R6 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup35Q8R4R6 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms