Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.74■□□□□ 0.27
Ushbp1Q8R370 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ushbp1Q8R370 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ushbp1Q8R370 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ushbp1Q8R370 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ushbp1Q8R370 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ushbp1Q8R370 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ushbp1Q8R370 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.74■□□□□ 0.27
Ushbp1Q8R370 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ushbp1Q8R370 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ushbp1Q8R370 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ushbp1Q8R370 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ushbp1Q8R370 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ushbp1Q8R370 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.74■□□□□ 0.27
Ushbp1Q8R370 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.74■□□□□ 0.27
Ushbp1Q8R370 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ushbp1Q8R370 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ushbp1Q8R370 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ushbp1Q8R370 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ushbp1Q8R370 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ushbp1Q8R370 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ushbp1Q8R370 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ushbp1Q8R370 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ushbp1Q8R370 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ushbp1Q8R370 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ushbp1Q8R370 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ushbp1Q8R370 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ushbp1Q8R370 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ushbp1Q8R370 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.73■□□□□ 0.27
Ushbp1Q8R370 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ushbp1Q8R370 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ushbp1Q8R370 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.73■□□□□ 0.27
Ushbp1Q8R370 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ushbp1Q8R370 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.73■□□□□ 0.27
Ushbp1Q8R370 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.73■□□□□ 0.27
Ushbp1Q8R370 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ushbp1Q8R370 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.73■□□□□ 0.27
Ushbp1Q8R370 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ushbp1Q8R370 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ushbp1Q8R370 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ushbp1Q8R370 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ushbp1Q8R370 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ushbp1Q8R370 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ushbp1Q8R370 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ushbp1Q8R370 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ushbp1Q8R370 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ushbp1Q8R370 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ushbp1Q8R370 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.73■□□□□ 0.27
Ushbp1Q8R370 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ushbp1Q8R370 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ushbp1Q8R370 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ushbp1Q8R370 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ushbp1Q8R370 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ushbp1Q8R370 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ushbp1Q8R370 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.72■□□□□ 0.27
Ushbp1Q8R370 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Ushbp1Q8R370 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ushbp1Q8R370 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Ushbp1Q8R370 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ushbp1Q8R370 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ushbp1Q8R370 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ushbp1Q8R370 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.72■□□□□ 0.27
Ushbp1Q8R370 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
Ushbp1Q8R370 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ushbp1Q8R370 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.72■□□□□ 0.27
Ushbp1Q8R370 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ushbp1Q8R370 Gm44872-201ENSMUST00000207864 420 ntBASIC16.72■□□□□ 0.27
Ushbp1Q8R370 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.72■□□□□ 0.27
Ushbp1Q8R370 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ushbp1Q8R370 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ushbp1Q8R370 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ushbp1Q8R370 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ushbp1Q8R370 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.72■□□□□ 0.27
Ushbp1Q8R370 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ushbp1Q8R370 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ushbp1Q8R370 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.71■□□□□ 0.27
Ushbp1Q8R370 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ushbp1Q8R370 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ushbp1Q8R370 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ushbp1Q8R370 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ushbp1Q8R370 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ushbp1Q8R370 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
Ushbp1Q8R370 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ushbp1Q8R370 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Ushbp1Q8R370 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ushbp1Q8R370 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.71■□□□□ 0.27
Ushbp1Q8R370 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ushbp1Q8R370 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.71■□□□□ 0.27
Ushbp1Q8R370 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ushbp1Q8R370 Gm44492-201ENSMUST00000197012 141 ntBASIC16.71■□□□□ 0.27
Ushbp1Q8R370 Gm7787-201ENSMUST00000216858 688 ntBASIC16.71■□□□□ 0.27
Ushbp1Q8R370 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ushbp1Q8R370 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ushbp1Q8R370 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ushbp1Q8R370 Gm8396-201ENSMUST00000057361 823 ntBASIC16.71■□□□□ 0.27
Ushbp1Q8R370 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ushbp1Q8R370 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.71■□□□□ 0.27
Ushbp1Q8R370 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ushbp1Q8R370 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ushbp1Q8R370 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms