Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp7Q8R1T1 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp7Q8R1T1 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp7Q8R1T1 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp7Q8R1T1 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp7Q8R1T1 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp7Q8R1T1 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC19.05■□□□□ 0.64
Chmp7Q8R1T1 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp7Q8R1T1 AC140375.2-201ENSMUST00000225283 584 ntBASIC19.05■□□□□ 0.64
Chmp7Q8R1T1 Mxra8os-201ENSMUST00000097740 687 ntBASIC19.05■□□□□ 0.64
Chmp7Q8R1T1 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp7Q8R1T1 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Chmp7Q8R1T1 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp7Q8R1T1 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp7Q8R1T1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp7Q8R1T1 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp7Q8R1T1 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp7Q8R1T1 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp7Q8R1T1 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp7Q8R1T1 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp7Q8R1T1 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp7Q8R1T1 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp7Q8R1T1 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp7Q8R1T1 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Chmp7Q8R1T1 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC19.04■□□□□ 0.64
Chmp7Q8R1T1 Gm24543-201ENSMUST00000103867 82 ntBASIC19.04■□□□□ 0.64
Chmp7Q8R1T1 Gm15487-201ENSMUST00000122373 465 ntBASIC19.04■□□□□ 0.64
Chmp7Q8R1T1 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp7Q8R1T1 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp7Q8R1T1 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC19.04■□□□□ 0.64
Chmp7Q8R1T1 AC090659.2-201ENSMUST00000225378 1186 ntBASIC19.04■□□□□ 0.64
Chmp7Q8R1T1 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp7Q8R1T1 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp7Q8R1T1 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp7Q8R1T1 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp7Q8R1T1 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp7Q8R1T1 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp7Q8R1T1 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp7Q8R1T1 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Chmp7Q8R1T1 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp7Q8R1T1 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp7Q8R1T1 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp7Q8R1T1 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp7Q8R1T1 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp7Q8R1T1 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp7Q8R1T1 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp7Q8R1T1 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp7Q8R1T1 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Chmp7Q8R1T1 Gm5566-201ENSMUST00000116118 459 ntBASIC19.03■□□□□ 0.64
Chmp7Q8R1T1 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Chmp7Q8R1T1 Gm7775-201ENSMUST00000218871 853 ntBASIC19.03■□□□□ 0.64
Chmp7Q8R1T1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp7Q8R1T1 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp7Q8R1T1 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Chmp7Q8R1T1 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Chmp7Q8R1T1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp7Q8R1T1 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp7Q8R1T1 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Chmp7Q8R1T1 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp7Q8R1T1 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp7Q8R1T1 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp7Q8R1T1 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp7Q8R1T1 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp7Q8R1T1 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp7Q8R1T1 Gm14719-201ENSMUST00000121891 340 ntBASIC19.02■□□□□ 0.64
Chmp7Q8R1T1 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC19.02■□□□□ 0.64
Chmp7Q8R1T1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp7Q8R1T1 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC19.02■□□□□ 0.64
Chmp7Q8R1T1 Gm6944-201ENSMUST00000182449 1006 ntBASIC19.02■□□□□ 0.64
Chmp7Q8R1T1 Gm7730-201ENSMUST00000212486 454 ntBASIC19.02■□□□□ 0.64
Chmp7Q8R1T1 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp7Q8R1T1 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp7Q8R1T1 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp7Q8R1T1 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Chmp7Q8R1T1 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Chmp7Q8R1T1 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Chmp7Q8R1T1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Chmp7Q8R1T1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Chmp7Q8R1T1 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp7Q8R1T1 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp7Q8R1T1 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp7Q8R1T1 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Chmp7Q8R1T1 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC19.01■□□□□ 0.63
Chmp7Q8R1T1 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC19.01■□□□□ 0.63
Chmp7Q8R1T1 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp7Q8R1T1 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp7Q8R1T1 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp7Q8R1T1 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp7Q8R1T1 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp7Q8R1T1 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp7Q8R1T1 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp7Q8R1T1 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp7Q8R1T1 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp7Q8R1T1 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp7Q8R1T1 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Chmp7Q8R1T1 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp7Q8R1T1 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp7Q8R1T1 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Chmp7Q8R1T1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp7Q8R1T1 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms