Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Zcchc9Q8R1J3 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Zcchc9Q8R1J3 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.93□□□□□ -0.02
Zcchc9Q8R1J3 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Zcchc9Q8R1J3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Zcchc9Q8R1J3 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Zcchc9Q8R1J3 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Zcchc9Q8R1J3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Zcchc9Q8R1J3 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Zcchc9Q8R1J3 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Zcchc9Q8R1J3 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.93□□□□□ -0.02
Zcchc9Q8R1J3 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Zcchc9Q8R1J3 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Zcchc9Q8R1J3 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 Mir449b-201ENSMUST00000104833 80 ntBASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 Gm10499-201ENSMUST00000174094 934 ntBASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 Mir7023-201ENSMUST00000185093 64 ntBASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Zcchc9Q8R1J3 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Zcchc9Q8R1J3 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Zcchc9Q8R1J3 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Zcchc9Q8R1J3 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Zcchc9Q8R1J3 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Zcchc9Q8R1J3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Zcchc9Q8R1J3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Zcchc9Q8R1J3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Zcchc9Q8R1J3 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Zcchc9Q8R1J3 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.91□□□□□ -0.02
Zcchc9Q8R1J3 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.91□□□□□ -0.02
Zcchc9Q8R1J3 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Zcchc9Q8R1J3 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Zcchc9Q8R1J3 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.91□□□□□ -0.02
Zcchc9Q8R1J3 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Zcchc9Q8R1J3 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Zcchc9Q8R1J3 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.91□□□□□ -0.02
Zcchc9Q8R1J3 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Zcchc9Q8R1J3 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Zcchc9Q8R1J3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Zcchc9Q8R1J3 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Zcchc9Q8R1J3 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Zcchc9Q8R1J3 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Zcchc9Q8R1J3 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Zcchc9Q8R1J3 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.91□□□□□ -0.02
Zcchc9Q8R1J3 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Zcchc9Q8R1J3 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Zcchc9Q8R1J3 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Zcchc9Q8R1J3 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.91□□□□□ -0.02
Zcchc9Q8R1J3 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Zcchc9Q8R1J3 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Zcchc9Q8R1J3 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Zcchc9Q8R1J3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Zcchc9Q8R1J3 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.9□□□□□ -0.02
Zcchc9Q8R1J3 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Zcchc9Q8R1J3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Zcchc9Q8R1J3 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Zcchc9Q8R1J3 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Zcchc9Q8R1J3 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Zcchc9Q8R1J3 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Zcchc9Q8R1J3 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Zcchc9Q8R1J3 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.9□□□□□ -0.02
Zcchc9Q8R1J3 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.9□□□□□ -0.02
Zcchc9Q8R1J3 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Zcchc9Q8R1J3 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Zcchc9Q8R1J3 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Zcchc9Q8R1J3 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Zcchc9Q8R1J3 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Zcchc9Q8R1J3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.9□□□□□ -0.02
Zcchc9Q8R1J3 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Zcchc9Q8R1J3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms