Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Treml1Q8K558 Gm10175-201ENSMUST00000086013 645 ntBASIC14.73□□□□□ -0.05
Treml1Q8K558 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.73□□□□□ -0.05
Treml1Q8K558 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Treml1Q8K558 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Treml1Q8K558 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Treml1Q8K558 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Treml1Q8K558 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Treml1Q8K558 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Treml1Q8K558 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Treml1Q8K558 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Treml1Q8K558 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Treml1Q8K558 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Treml1Q8K558 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Treml1Q8K558 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Treml1Q8K558 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Treml1Q8K558 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Treml1Q8K558 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Treml1Q8K558 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.73□□□□□ -0.05
Treml1Q8K558 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Treml1Q8K558 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Treml1Q8K558 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Treml1Q8K558 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Treml1Q8K558 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Treml1Q8K558 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Treml1Q8K558 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Treml1Q8K558 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Treml1Q8K558 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Treml1Q8K558 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Treml1Q8K558 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Treml1Q8K558 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.72□□□□□ -0.05
Treml1Q8K558 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.72□□□□□ -0.05
Treml1Q8K558 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.72□□□□□ -0.05
Treml1Q8K558 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.72□□□□□ -0.05
Treml1Q8K558 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Treml1Q8K558 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Treml1Q8K558 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Treml1Q8K558 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Treml1Q8K558 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Treml1Q8K558 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Treml1Q8K558 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Treml1Q8K558 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Treml1Q8K558 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Treml1Q8K558 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Treml1Q8K558 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Treml1Q8K558 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Treml1Q8K558 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Treml1Q8K558 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Treml1Q8K558 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Treml1Q8K558 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Treml1Q8K558 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Treml1Q8K558 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.71□□□□□ -0.05
Treml1Q8K558 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Treml1Q8K558 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Treml1Q8K558 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Treml1Q8K558 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Treml1Q8K558 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Treml1Q8K558 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Treml1Q8K558 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Treml1Q8K558 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.71□□□□□ -0.05
Treml1Q8K558 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Treml1Q8K558 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.71□□□□□ -0.05
Treml1Q8K558 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.71□□□□□ -0.05
Treml1Q8K558 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Treml1Q8K558 Thap2-203ENSMUST00000218989 527 ntBASIC14.71□□□□□ -0.05
Treml1Q8K558 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Treml1Q8K558 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Treml1Q8K558 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Treml1Q8K558 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Treml1Q8K558 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Treml1Q8K558 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Treml1Q8K558 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Treml1Q8K558 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Treml1Q8K558 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Treml1Q8K558 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Treml1Q8K558 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Treml1Q8K558 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Treml1Q8K558 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Treml1Q8K558 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Treml1Q8K558 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Treml1Q8K558 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Treml1Q8K558 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Treml1Q8K558 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Treml1Q8K558 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Treml1Q8K558 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Treml1Q8K558 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Treml1Q8K558 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Treml1Q8K558 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Treml1Q8K558 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Treml1Q8K558 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.7□□□□□ -0.06
Treml1Q8K558 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.7□□□□□ -0.06
Treml1Q8K558 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Treml1Q8K558 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Treml1Q8K558 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.7□□□□□ -0.06
Treml1Q8K558 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Treml1Q8K558 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Treml1Q8K558 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Treml1Q8K558 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Treml1Q8K558 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Treml1Q8K558 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms