Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.29■□□□□ 0.52
Sf3a1Q8K4Z5 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sf3a1Q8K4Z5 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC18.29■□□□□ 0.52
Sf3a1Q8K4Z5 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sf3a1Q8K4Z5 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sf3a1Q8K4Z5 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Sf3a1Q8K4Z5 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Sf3a1Q8K4Z5 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sf3a1Q8K4Z5 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sf3a1Q8K4Z5 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sf3a1Q8K4Z5 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Sf3a1Q8K4Z5 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sf3a1Q8K4Z5 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sf3a1Q8K4Z5 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sf3a1Q8K4Z5 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sf3a1Q8K4Z5 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sf3a1Q8K4Z5 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC18.28■□□□□ 0.52
Sf3a1Q8K4Z5 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sf3a1Q8K4Z5 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sf3a1Q8K4Z5 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.28■□□□□ 0.52
Sf3a1Q8K4Z5 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.28■□□□□ 0.52
Sf3a1Q8K4Z5 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Sf3a1Q8K4Z5 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC18.28■□□□□ 0.52
Sf3a1Q8K4Z5 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sf3a1Q8K4Z5 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sf3a1Q8K4Z5 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC18.28■□□□□ 0.52
Sf3a1Q8K4Z5 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sf3a1Q8K4Z5 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sf3a1Q8K4Z5 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sf3a1Q8K4Z5 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sf3a1Q8K4Z5 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sf3a1Q8K4Z5 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sf3a1Q8K4Z5 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sf3a1Q8K4Z5 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sf3a1Q8K4Z5 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sf3a1Q8K4Z5 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sf3a1Q8K4Z5 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sf3a1Q8K4Z5 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sf3a1Q8K4Z5 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sf3a1Q8K4Z5 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC18.27■□□□□ 0.52
Sf3a1Q8K4Z5 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sf3a1Q8K4Z5 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sf3a1Q8K4Z5 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sf3a1Q8K4Z5 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC18.27■□□□□ 0.52
Sf3a1Q8K4Z5 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sf3a1Q8K4Z5 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sf3a1Q8K4Z5 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sf3a1Q8K4Z5 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sf3a1Q8K4Z5 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Gm12892-201ENSMUST00000117367 1146 ntBASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Gm27301-201ENSMUST00000184012 127 ntBASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Mxra8os-201ENSMUST00000097740 687 ntBASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Gm43195-201ENSMUST00000200614 2332 ntBASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3a1Q8K4Z5 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sf3a1Q8K4Z5 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sf3a1Q8K4Z5 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Sf3a1Q8K4Z5 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sf3a1Q8K4Z5 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Sf3a1Q8K4Z5 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC18.25■□□□□ 0.51
Sf3a1Q8K4Z5 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC18.25■□□□□ 0.51
Sf3a1Q8K4Z5 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sf3a1Q8K4Z5 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sf3a1Q8K4Z5 Gm4995-201ENSMUST00000117247 432 ntBASIC18.25■□□□□ 0.51
Sf3a1Q8K4Z5 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.25■□□□□ 0.51
Sf3a1Q8K4Z5 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms