Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 Gm8344-201ENSMUST00000119813 856 ntBASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 Rprl3-201ENSMUST00000157400 290 ntBASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 Gm5587-201ENSMUST00000206270 674 ntBASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cnot3Q8K0V4 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Celf4-206ENSMUST00000224553 1729 ntBASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Gm6433-201ENSMUST00000118634 875 ntBASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cnot3Q8K0V4 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.03□□□□□ -0.16
Cnot3Q8K0V4 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cnot3Q8K0V4 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cnot3Q8K0V4 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cnot3Q8K0V4 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cnot3Q8K0V4 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cnot3Q8K0V4 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cnot3Q8K0V4 Gm11950-201ENSMUST00000121615 838 ntBASIC14.03□□□□□ -0.16
Cnot3Q8K0V4 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.03□□□□□ -0.16
Cnot3Q8K0V4 Gm23547-201ENSMUST00000158210 271 ntBASIC14.03□□□□□ -0.16
Cnot3Q8K0V4 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cnot3Q8K0V4 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cnot3Q8K0V4 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.03□□□□□ -0.16
Cnot3Q8K0V4 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.03□□□□□ -0.16
Cnot3Q8K0V4 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.03□□□□□ -0.16
Cnot3Q8K0V4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Cnot3Q8K0V4 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cnot3Q8K0V4 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cnot3Q8K0V4 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cnot3Q8K0V4 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cnot3Q8K0V4 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Cnot3Q8K0V4 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms