Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab11fip3Q8CHD8 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab11fip3Q8CHD8 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rab11fip3Q8CHD8 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab11fip3Q8CHD8 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab11fip3Q8CHD8 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC19.29■□□□□ 0.68
Rab11fip3Q8CHD8 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab11fip3Q8CHD8 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab11fip3Q8CHD8 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab11fip3Q8CHD8 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab11fip3Q8CHD8 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC19.29■□□□□ 0.68
Rab11fip3Q8CHD8 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rab11fip3Q8CHD8 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rab11fip3Q8CHD8 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rab11fip3Q8CHD8 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rab11fip3Q8CHD8 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab11fip3Q8CHD8 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab11fip3Q8CHD8 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rab11fip3Q8CHD8 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
Rab11fip3Q8CHD8 Gm8749-201ENSMUST00000117737 331 ntBASIC19.28■□□□□ 0.68
Rab11fip3Q8CHD8 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Rab11fip3Q8CHD8 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Rab11fip3Q8CHD8 Gm25144-201ENSMUST00000179561 110 ntBASIC19.28■□□□□ 0.68
Rab11fip3Q8CHD8 Gm25352-201ENSMUST00000179815 110 ntBASIC19.28■□□□□ 0.68
Rab11fip3Q8CHD8 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab11fip3Q8CHD8 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab11fip3Q8CHD8 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab11fip3Q8CHD8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Rab11fip3Q8CHD8 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rab11fip3Q8CHD8 AC159621.2-201ENSMUST00000223519 1326 ntBASIC19.27■□□□□ 0.68
Rab11fip3Q8CHD8 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rab11fip3Q8CHD8 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rab11fip3Q8CHD8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rab11fip3Q8CHD8 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Rab11fip3Q8CHD8 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rab11fip3Q8CHD8 Gm13015-201ENSMUST00000118674 204 ntBASIC19.27■□□□□ 0.68
Rab11fip3Q8CHD8 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC19.27■□□□□ 0.68
Rab11fip3Q8CHD8 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rab11fip3Q8CHD8 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Rab11fip3Q8CHD8 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Rab11fip3Q8CHD8 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rab11fip3Q8CHD8 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rab11fip3Q8CHD8 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rab11fip3Q8CHD8 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rab11fip3Q8CHD8 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Rab11fip3Q8CHD8 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab11fip3Q8CHD8 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rab11fip3Q8CHD8 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Rab11fip3Q8CHD8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab11fip3Q8CHD8 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Rab11fip3Q8CHD8 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Rab11fip3Q8CHD8 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab11fip3Q8CHD8 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rab11fip3Q8CHD8 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab11fip3Q8CHD8 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Rab11fip3Q8CHD8 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab11fip3Q8CHD8 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab11fip3Q8CHD8 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC19.26■□□□□ 0.67
Rab11fip3Q8CHD8 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rab11fip3Q8CHD8 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC19.26■□□□□ 0.67
Rab11fip3Q8CHD8 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC19.26■□□□□ 0.67
Rab11fip3Q8CHD8 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab11fip3Q8CHD8 Gm27622-201ENSMUST00000183779 60 ntBASIC19.26■□□□□ 0.67
Rab11fip3Q8CHD8 Ighv8-7-201ENSMUST00000194349 297 ntBASIC19.26■□□□□ 0.67
Rab11fip3Q8CHD8 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rab11fip3Q8CHD8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Rab11fip3Q8CHD8 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab11fip3Q8CHD8 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab11fip3Q8CHD8 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab11fip3Q8CHD8 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab11fip3Q8CHD8 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab11fip3Q8CHD8 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab11fip3Q8CHD8 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab11fip3Q8CHD8 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Rab11fip3Q8CHD8 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rab11fip3Q8CHD8 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab11fip3Q8CHD8 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab11fip3Q8CHD8 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC19.25■□□□□ 0.67
Rab11fip3Q8CHD8 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab11fip3Q8CHD8 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC19.25■□□□□ 0.67
Rab11fip3Q8CHD8 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab11fip3Q8CHD8 CT010478.1-201ENSMUST00000220747 2787 ntBASIC19.25■□□□□ 0.67
Rab11fip3Q8CHD8 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab11fip3Q8CHD8 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab11fip3Q8CHD8 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab11fip3Q8CHD8 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab11fip3Q8CHD8 Gm14057-201ENSMUST00000120631 482 ntBASIC19.25■□□□□ 0.67
Rab11fip3Q8CHD8 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab11fip3Q8CHD8 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab11fip3Q8CHD8 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC19.25■□□□□ 0.67
Rab11fip3Q8CHD8 Gm29541-201ENSMUST00000191351 678 ntBASIC19.25■□□□□ 0.67
Rab11fip3Q8CHD8 Gm45098-201ENSMUST00000207179 657 ntBASIC19.25■□□□□ 0.67
Rab11fip3Q8CHD8 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rab11fip3Q8CHD8 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab11fip3Q8CHD8 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab11fip3Q8CHD8 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab11fip3Q8CHD8 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rab11fip3Q8CHD8 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rab11fip3Q8CHD8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC19.25■□□□□ 0.67
Rab11fip3Q8CHD8 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms