Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rp1l1Q8CGM2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rp1l1Q8CGM2 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rp1l1Q8CGM2 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.28■□□□□ 0.04
Rp1l1Q8CGM2 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rp1l1Q8CGM2 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rp1l1Q8CGM2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rp1l1Q8CGM2 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.27■□□□□ 0.04
Rp1l1Q8CGM2 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rp1l1Q8CGM2 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rp1l1Q8CGM2 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rp1l1Q8CGM2 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.27■□□□□ 0.04
Rp1l1Q8CGM2 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rp1l1Q8CGM2 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rp1l1Q8CGM2 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rp1l1Q8CGM2 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC15.27■□□□□ 0.04
Rp1l1Q8CGM2 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC15.27■□□□□ 0.04
Rp1l1Q8CGM2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.27■□□□□ 0.04
Rp1l1Q8CGM2 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rp1l1Q8CGM2 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC15.27■□□□□ 0.04
Rp1l1Q8CGM2 Gm18307-201ENSMUST00000206864 949 ntBASIC15.27■□□□□ 0.04
Rp1l1Q8CGM2 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC15.27■□□□□ 0.04
Rp1l1Q8CGM2 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rp1l1Q8CGM2 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rp1l1Q8CGM2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rp1l1Q8CGM2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rp1l1Q8CGM2 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC15.27■□□□□ 0.04
Rp1l1Q8CGM2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rp1l1Q8CGM2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Rp1l1Q8CGM2 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rp1l1Q8CGM2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rp1l1Q8CGM2 Gm42690-201ENSMUST00000197921 1836 ntBASIC15.27■□□□□ 0.03
Rp1l1Q8CGM2 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rp1l1Q8CGM2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rp1l1Q8CGM2 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rp1l1Q8CGM2 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rp1l1Q8CGM2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.27■□□□□ 0.03
Rp1l1Q8CGM2 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rp1l1Q8CGM2 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rp1l1Q8CGM2 Gm42853-201ENSMUST00000201273 1387 ntBASIC15.27■□□□□ 0.03
Rp1l1Q8CGM2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rp1l1Q8CGM2 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rp1l1Q8CGM2 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rp1l1Q8CGM2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Rp1l1Q8CGM2 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rp1l1Q8CGM2 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rp1l1Q8CGM2 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rp1l1Q8CGM2 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rp1l1Q8CGM2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rp1l1Q8CGM2 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.26■□□□□ 0.03
Rp1l1Q8CGM2 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rp1l1Q8CGM2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rp1l1Q8CGM2 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.26■□□□□ 0.03
Rp1l1Q8CGM2 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rp1l1Q8CGM2 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.26■□□□□ 0.03
Rp1l1Q8CGM2 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC15.26■□□□□ 0.03
Rp1l1Q8CGM2 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rp1l1Q8CGM2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rp1l1Q8CGM2 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rp1l1Q8CGM2 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rp1l1Q8CGM2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rp1l1Q8CGM2 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rp1l1Q8CGM2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rp1l1Q8CGM2 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rp1l1Q8CGM2 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.25■□□□□ 0.03
Rp1l1Q8CGM2 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rp1l1Q8CGM2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rp1l1Q8CGM2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rp1l1Q8CGM2 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC15.25■□□□□ 0.03
Rp1l1Q8CGM2 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rp1l1Q8CGM2 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rp1l1Q8CGM2 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC15.25■□□□□ 0.03
Rp1l1Q8CGM2 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rp1l1Q8CGM2 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rp1l1Q8CGM2 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rp1l1Q8CGM2 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rp1l1Q8CGM2 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rp1l1Q8CGM2 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rp1l1Q8CGM2 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC15.25■□□□□ 0.03
Rp1l1Q8CGM2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.25■□□□□ 0.03
Rp1l1Q8CGM2 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rp1l1Q8CGM2 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.25■□□□□ 0.03
Rp1l1Q8CGM2 Gm17795-201ENSMUST00000214505 757 ntBASIC15.25■□□□□ 0.03
Rp1l1Q8CGM2 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rp1l1Q8CGM2 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rp1l1Q8CGM2 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rp1l1Q8CGM2 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rp1l1Q8CGM2 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.25■□□□□ 0.03
Rp1l1Q8CGM2 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rp1l1Q8CGM2 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rp1l1Q8CGM2 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rp1l1Q8CGM2 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rp1l1Q8CGM2 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rp1l1Q8CGM2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
Rp1l1Q8CGM2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Rp1l1Q8CGM2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rp1l1Q8CGM2 Gm38037-201ENSMUST00000192600 1624 ntBASIC15.24■□□□□ 0.03
Rp1l1Q8CGM2 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rp1l1Q8CGM2 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rp1l1Q8CGM2 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms