Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Smc2Q8CG48 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc2Q8CG48 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smc2Q8CG48 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc2Q8CG48 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc2Q8CG48 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Smc2Q8CG48 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smc2Q8CG48 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Smc2Q8CG48 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smc2Q8CG48 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.13■□□□□ 0.33
Smc2Q8CG48 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smc2Q8CG48 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc2Q8CG48 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc2Q8CG48 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc2Q8CG48 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc2Q8CG48 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc2Q8CG48 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc2Q8CG48 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smc2Q8CG48 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc2Q8CG48 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Smc2Q8CG48 Efs-202ENSMUST00000227037 2540 ntBASIC17.12■□□□□ 0.33
Smc2Q8CG48 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc2Q8CG48 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc2Q8CG48 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc2Q8CG48 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Smc2Q8CG48 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc2Q8CG48 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc2Q8CG48 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc2Q8CG48 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smc2Q8CG48 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.12■□□□□ 0.33
Smc2Q8CG48 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.12■□□□□ 0.33
Smc2Q8CG48 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Smc2Q8CG48 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc2Q8CG48 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smc2Q8CG48 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smc2Q8CG48 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc2Q8CG48 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc2Q8CG48 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smc2Q8CG48 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc2Q8CG48 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc2Q8CG48 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc2Q8CG48 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc2Q8CG48 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc2Q8CG48 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc2Q8CG48 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.11■□□□□ 0.33
Smc2Q8CG48 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Smc2Q8CG48 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc2Q8CG48 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smc2Q8CG48 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc2Q8CG48 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc2Q8CG48 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smc2Q8CG48 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc2Q8CG48 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.11■□□□□ 0.33
Smc2Q8CG48 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.11■□□□□ 0.33
Smc2Q8CG48 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.11■□□□□ 0.33
Smc2Q8CG48 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc2Q8CG48 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc2Q8CG48 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc2Q8CG48 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc2Q8CG48 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc2Q8CG48 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc2Q8CG48 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc2Q8CG48 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smc2Q8CG48 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc2Q8CG48 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc2Q8CG48 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc2Q8CG48 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc2Q8CG48 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.1■□□□□ 0.33
Smc2Q8CG48 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smc2Q8CG48 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smc2Q8CG48 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.1■□□□□ 0.33
Smc2Q8CG48 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc2Q8CG48 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc2Q8CG48 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.1■□□□□ 0.33
Smc2Q8CG48 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smc2Q8CG48 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Smc2Q8CG48 Gm18195-201ENSMUST00000207604 706 ntBASIC17.1■□□□□ 0.33
Smc2Q8CG48 Gm45167-201ENSMUST00000208007 322 ntBASIC17.1■□□□□ 0.33
Smc2Q8CG48 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.1■□□□□ 0.33
Smc2Q8CG48 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.1■□□□□ 0.33
Smc2Q8CG48 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Smc2Q8CG48 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Smc2Q8CG48 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.1■□□□□ 0.33
Smc2Q8CG48 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smc2Q8CG48 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc2Q8CG48 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Smc2Q8CG48 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc2Q8CG48 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smc2Q8CG48 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc2Q8CG48 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
Smc2Q8CG48 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc2Q8CG48 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc2Q8CG48 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
Smc2Q8CG48 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc2Q8CG48 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc2Q8CG48 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc2Q8CG48 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc2Q8CG48 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc2Q8CG48 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc2Q8CG48 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms