Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.4■□□□□ 0.54
Smc4Q8CG47 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc4Q8CG47 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Smc4Q8CG47 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC18.4■□□□□ 0.54
Smc4Q8CG47 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc4Q8CG47 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc4Q8CG47 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc4Q8CG47 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc4Q8CG47 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Smc4Q8CG47 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Smc4Q8CG47 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc4Q8CG47 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smc4Q8CG47 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc4Q8CG47 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc4Q8CG47 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc4Q8CG47 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc4Q8CG47 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc4Q8CG47 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Smc4Q8CG47 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Smc4Q8CG47 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Smc4Q8CG47 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Smc4Q8CG47 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc4Q8CG47 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Smc4Q8CG47 Mir6956-201ENSMUST00000183598 62 ntBASIC18.39■□□□□ 0.53
Smc4Q8CG47 Gm27430-201ENSMUST00000184585 107 ntBASIC18.39■□□□□ 0.53
Smc4Q8CG47 Gm44333-201ENSMUST00000197168 107 ntBASIC18.39■□□□□ 0.53
Smc4Q8CG47 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC18.39■□□□□ 0.53
Smc4Q8CG47 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc4Q8CG47 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smc4Q8CG47 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
Smc4Q8CG47 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc4Q8CG47 Gm42934-201ENSMUST00000196920 1345 ntBASIC18.39■□□□□ 0.53
Smc4Q8CG47 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc4Q8CG47 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc4Q8CG47 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Smc4Q8CG47 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc4Q8CG47 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Smc4Q8CG47 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc4Q8CG47 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.39■□□□□ 0.53
Smc4Q8CG47 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc4Q8CG47 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc4Q8CG47 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc4Q8CG47 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc4Q8CG47 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smc4Q8CG47 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc4Q8CG47 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Smc4Q8CG47 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc4Q8CG47 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Smc4Q8CG47 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Smc4Q8CG47 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc4Q8CG47 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Smc4Q8CG47 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smc4Q8CG47 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc4Q8CG47 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC18.38■□□□□ 0.53
Smc4Q8CG47 Gm27920-201ENSMUST00000183953 96 ntBASIC18.38■□□□□ 0.53
Smc4Q8CG47 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smc4Q8CG47 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC18.38■□□□□ 0.53
Smc4Q8CG47 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC18.38■□□□□ 0.53
Smc4Q8CG47 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smc4Q8CG47 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc4Q8CG47 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc4Q8CG47 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc4Q8CG47 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Smc4Q8CG47 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smc4Q8CG47 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc4Q8CG47 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Smc4Q8CG47 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC18.38■□□□□ 0.53
Smc4Q8CG47 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc4Q8CG47 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc4Q8CG47 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Smc4Q8CG47 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc4Q8CG47 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smc4Q8CG47 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc4Q8CG47 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc4Q8CG47 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc4Q8CG47 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Smc4Q8CG47 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smc4Q8CG47 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC18.37■□□□□ 0.53
Smc4Q8CG47 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Smc4Q8CG47 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smc4Q8CG47 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smc4Q8CG47 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC18.37■□□□□ 0.53
Smc4Q8CG47 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
Smc4Q8CG47 Gm10313-201ENSMUST00000095320 1002 ntBASIC18.37■□□□□ 0.53
Smc4Q8CG47 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Smc4Q8CG47 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc4Q8CG47 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Smc4Q8CG47 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc4Q8CG47 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc4Q8CG47 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smc4Q8CG47 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smc4Q8CG47 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc4Q8CG47 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc4Q8CG47 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc4Q8CG47 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc4Q8CG47 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc4Q8CG47 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc4Q8CG47 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc4Q8CG47 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc4Q8CG47 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms