Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nup88Q8CEC0 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup88Q8CEC0 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup88Q8CEC0 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup88Q8CEC0 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nup88Q8CEC0 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup88Q8CEC0 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup88Q8CEC0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.65■□□□□ 0.42
Nup88Q8CEC0 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Nup88Q8CEC0 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup88Q8CEC0 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Nup88Q8CEC0 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup88Q8CEC0 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Nup88Q8CEC0 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nup88Q8CEC0 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nup88Q8CEC0 Mir3113-201ENSMUST00000175478 76 ntBASIC17.65■□□□□ 0.42
Nup88Q8CEC0 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.65■□□□□ 0.42
Nup88Q8CEC0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup88Q8CEC0 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup88Q8CEC0 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup88Q8CEC0 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Nup88Q8CEC0 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.65■□□□□ 0.42
Nup88Q8CEC0 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Nup88Q8CEC0 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup88Q8CEC0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup88Q8CEC0 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.42
Nup88Q8CEC0 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nup88Q8CEC0 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Nup88Q8CEC0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nup88Q8CEC0 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup88Q8CEC0 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nup88Q8CEC0 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup88Q8CEC0 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nup88Q8CEC0 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nup88Q8CEC0 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Nup88Q8CEC0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nup88Q8CEC0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.64■□□□□ 0.41
Nup88Q8CEC0 Gm37153-201ENSMUST00000193637 231 ntBASIC17.64■□□□□ 0.41
Nup88Q8CEC0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nup88Q8CEC0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nup88Q8CEC0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nup88Q8CEC0 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup88Q8CEC0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nup88Q8CEC0 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup88Q8CEC0 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup88Q8CEC0 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup88Q8CEC0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Nup88Q8CEC0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup88Q8CEC0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup88Q8CEC0 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup88Q8CEC0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nup88Q8CEC0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Nup88Q8CEC0 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Nup88Q8CEC0 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Nup88Q8CEC0 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Nup88Q8CEC0 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nup88Q8CEC0 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup88Q8CEC0 Gm15358-201ENSMUST00000119249 520 ntBASIC17.63■□□□□ 0.41
Nup88Q8CEC0 Gm14822-201ENSMUST00000122247 291 ntBASIC17.63■□□□□ 0.41
Nup88Q8CEC0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.63■□□□□ 0.41
Nup88Q8CEC0 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.63■□□□□ 0.41
Nup88Q8CEC0 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Nup88Q8CEC0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.63■□□□□ 0.41
Nup88Q8CEC0 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.63■□□□□ 0.41
Nup88Q8CEC0 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup88Q8CEC0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup88Q8CEC0 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Nup88Q8CEC0 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup88Q8CEC0 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nup88Q8CEC0 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup88Q8CEC0 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup88Q8CEC0 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.63■□□□□ 0.41
Nup88Q8CEC0 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Nup88Q8CEC0 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup88Q8CEC0 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup88Q8CEC0 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup88Q8CEC0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Nup88Q8CEC0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup88Q8CEC0 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Nup88Q8CEC0 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.62■□□□□ 0.41
Nup88Q8CEC0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup88Q8CEC0 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup88Q8CEC0 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nup88Q8CEC0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup88Q8CEC0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nup88Q8CEC0 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup88Q8CEC0 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup88Q8CEC0 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup88Q8CEC0 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup88Q8CEC0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup88Q8CEC0 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Nup88Q8CEC0 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup88Q8CEC0 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.62■□□□□ 0.41
Nup88Q8CEC0 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup88Q8CEC0 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup88Q8CEC0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup88Q8CEC0 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup88Q8CEC0 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup88Q8CEC0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup88Q8CEC0 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms