Protein–RNA interactions for Protein: Q8CCE9

E4f1, Transcription factor E4F1, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4f1Q8CCE9 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
E4f1Q8CCE9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
E4f1Q8CCE9 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
E4f1Q8CCE9 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
E4f1Q8CCE9 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
E4f1Q8CCE9 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
E4f1Q8CCE9 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
E4f1Q8CCE9 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
E4f1Q8CCE9 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
E4f1Q8CCE9 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
E4f1Q8CCE9 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
E4f1Q8CCE9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
E4f1Q8CCE9 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
E4f1Q8CCE9 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
E4f1Q8CCE9 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
E4f1Q8CCE9 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
E4f1Q8CCE9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
E4f1Q8CCE9 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
E4f1Q8CCE9 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
E4f1Q8CCE9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
E4f1Q8CCE9 Nupl1-207ENSMUST00000225311 2475 ntBASIC17.59■□□□□ 0.41
E4f1Q8CCE9 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
E4f1Q8CCE9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
E4f1Q8CCE9 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.58■□□□□ 0.41
E4f1Q8CCE9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
E4f1Q8CCE9 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
E4f1Q8CCE9 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.58■□□□□ 0.4
E4f1Q8CCE9 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
E4f1Q8CCE9 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
E4f1Q8CCE9 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
E4f1Q8CCE9 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.58■□□□□ 0.4
E4f1Q8CCE9 Gm13616-201ENSMUST00000120600 222 ntBASIC17.58■□□□□ 0.4
E4f1Q8CCE9 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
E4f1Q8CCE9 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
E4f1Q8CCE9 Gm44335-201ENSMUST00000196879 141 ntBASIC17.58■□□□□ 0.4
E4f1Q8CCE9 Gm44297-201ENSMUST00000198304 141 ntBASIC17.58■□□□□ 0.4
E4f1Q8CCE9 Gm44346-201ENSMUST00000198851 141 ntBASIC17.58■□□□□ 0.4
E4f1Q8CCE9 Gm45612-201ENSMUST00000211320 160 ntBASIC17.58■□□□□ 0.4
E4f1Q8CCE9 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
E4f1Q8CCE9 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
E4f1Q8CCE9 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
E4f1Q8CCE9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
E4f1Q8CCE9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.58■□□□□ 0.4
E4f1Q8CCE9 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
E4f1Q8CCE9 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
E4f1Q8CCE9 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.58■□□□□ 0.4
E4f1Q8CCE9 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
E4f1Q8CCE9 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
E4f1Q8CCE9 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
E4f1Q8CCE9 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
E4f1Q8CCE9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
E4f1Q8CCE9 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
E4f1Q8CCE9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.57■□□□□ 0.4
E4f1Q8CCE9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.57■□□□□ 0.4
E4f1Q8CCE9 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
E4f1Q8CCE9 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
E4f1Q8CCE9 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
E4f1Q8CCE9 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
E4f1Q8CCE9 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.57■□□□□ 0.4
E4f1Q8CCE9 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
E4f1Q8CCE9 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.57■□□□□ 0.4
E4f1Q8CCE9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
E4f1Q8CCE9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
E4f1Q8CCE9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
E4f1Q8CCE9 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
E4f1Q8CCE9 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
E4f1Q8CCE9 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
E4f1Q8CCE9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
E4f1Q8CCE9 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
E4f1Q8CCE9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
E4f1Q8CCE9 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
E4f1Q8CCE9 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
E4f1Q8CCE9 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
E4f1Q8CCE9 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
E4f1Q8CCE9 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.56■□□□□ 0.4
E4f1Q8CCE9 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
E4f1Q8CCE9 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
E4f1Q8CCE9 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.56■□□□□ 0.4
E4f1Q8CCE9 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
E4f1Q8CCE9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
E4f1Q8CCE9 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
E4f1Q8CCE9 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.56■□□□□ 0.4
E4f1Q8CCE9 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
E4f1Q8CCE9 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.56■□□□□ 0.4
E4f1Q8CCE9 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
E4f1Q8CCE9 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.56■□□□□ 0.4
E4f1Q8CCE9 Gm5312-201ENSMUST00000203728 547 ntBASIC17.56■□□□□ 0.4
E4f1Q8CCE9 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
E4f1Q8CCE9 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
E4f1Q8CCE9 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
E4f1Q8CCE9 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
E4f1Q8CCE9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
E4f1Q8CCE9 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
E4f1Q8CCE9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
E4f1Q8CCE9 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
E4f1Q8CCE9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
E4f1Q8CCE9 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
E4f1Q8CCE9 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
E4f1Q8CCE9 AC159649.2-201ENSMUST00000222984 3223 ntBASIC17.55■□□□□ 0.4
E4f1Q8CCE9 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms