Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Lysmd4Q8CC84 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Lysmd4Q8CC84 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd4Q8CC84 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd4Q8CC84 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd4Q8CC84 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd4Q8CC84 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd4Q8CC84 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd4Q8CC84 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd4Q8CC84 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd4Q8CC84 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Lysmd4Q8CC84 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd4Q8CC84 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd4Q8CC84 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd4Q8CC84 Gm15165-201ENSMUST00000118140 502 ntBASIC13.42□□□□□ -0.26
Lysmd4Q8CC84 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd4Q8CC84 Mir7071-201ENSMUST00000184847 69 ntBASIC13.42□□□□□ -0.26
Lysmd4Q8CC84 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd4Q8CC84 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.42□□□□□ -0.26
Lysmd4Q8CC84 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd4Q8CC84 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.42□□□□□ -0.26
Lysmd4Q8CC84 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd4Q8CC84 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd4Q8CC84 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd4Q8CC84 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd4Q8CC84 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Lysmd4Q8CC84 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd4Q8CC84 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.42□□□□□ -0.26
Lysmd4Q8CC84 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.42□□□□□ -0.26
Lysmd4Q8CC84 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd4Q8CC84 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd4Q8CC84 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd4Q8CC84 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Gm7506-201ENSMUST00000207758 815 ntBASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms