Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim9Q8C7M3 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim9Q8C7M3 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim9Q8C7M3 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trim9Q8C7M3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trim9Q8C7M3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Trim9Q8C7M3 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trim9Q8C7M3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim9Q8C7M3 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim9Q8C7M3 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim9Q8C7M3 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim9Q8C7M3 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Trim9Q8C7M3 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.48■□□□□ 0.23
Trim9Q8C7M3 Gm2272-201ENSMUST00000194903 582 ntBASIC16.48■□□□□ 0.23
Trim9Q8C7M3 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.48■□□□□ 0.23
Trim9Q8C7M3 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim9Q8C7M3 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim9Q8C7M3 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim9Q8C7M3 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim9Q8C7M3 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim9Q8C7M3 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim9Q8C7M3 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.48■□□□□ 0.23
Trim9Q8C7M3 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim9Q8C7M3 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim9Q8C7M3 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim9Q8C7M3 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim9Q8C7M3 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim9Q8C7M3 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim9Q8C7M3 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trim9Q8C7M3 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim9Q8C7M3 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim9Q8C7M3 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Trim9Q8C7M3 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim9Q8C7M3 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Trim9Q8C7M3 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim9Q8C7M3 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim9Q8C7M3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.47■□□□□ 0.23
Trim9Q8C7M3 Gm1401-201ENSMUST00000122048 772 ntBASIC16.47■□□□□ 0.23
Trim9Q8C7M3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.47■□□□□ 0.23
Trim9Q8C7M3 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.47■□□□□ 0.23
Trim9Q8C7M3 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim9Q8C7M3 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.47■□□□□ 0.23
Trim9Q8C7M3 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim9Q8C7M3 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim9Q8C7M3 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim9Q8C7M3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Trim9Q8C7M3 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim9Q8C7M3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim9Q8C7M3 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim9Q8C7M3 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim9Q8C7M3 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim9Q8C7M3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trim9Q8C7M3 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trim9Q8C7M3 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim9Q8C7M3 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim9Q8C7M3 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.47■□□□□ 0.23
Trim9Q8C7M3 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trim9Q8C7M3 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Trim9Q8C7M3 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.46■□□□□ 0.23
Trim9Q8C7M3 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim9Q8C7M3 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim9Q8C7M3 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.46■□□□□ 0.23
Trim9Q8C7M3 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim9Q8C7M3 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.46■□□□□ 0.23
Trim9Q8C7M3 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trim9Q8C7M3 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trim9Q8C7M3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.46■□□□□ 0.23
Trim9Q8C7M3 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.46■□□□□ 0.23
Trim9Q8C7M3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim9Q8C7M3 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.46■□□□□ 0.23
Trim9Q8C7M3 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.46■□□□□ 0.23
Trim9Q8C7M3 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim9Q8C7M3 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim9Q8C7M3 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim9Q8C7M3 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim9Q8C7M3 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trim9Q8C7M3 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim9Q8C7M3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trim9Q8C7M3 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim9Q8C7M3 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trim9Q8C7M3 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim9Q8C7M3 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim9Q8C7M3 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim9Q8C7M3 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim9Q8C7M3 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trim9Q8C7M3 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.45■□□□□ 0.22
Trim9Q8C7M3 Gm16198-201ENSMUST00000118766 670 ntBASIC16.45■□□□□ 0.22
Trim9Q8C7M3 Gm5177-201ENSMUST00000183092 997 ntBASIC16.45■□□□□ 0.22
Trim9Q8C7M3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.45■□□□□ 0.22
Trim9Q8C7M3 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trim9Q8C7M3 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Trim9Q8C7M3 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim9Q8C7M3 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim9Q8C7M3 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim9Q8C7M3 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim9Q8C7M3 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim9Q8C7M3 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim9Q8C7M3 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.45■□□□□ 0.22
Trim9Q8C7M3 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim9Q8C7M3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms