Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Ptcd1Q8C2E4 Gm13015-201ENSMUST00000118674 204 ntBASIC18.37■□□□□ 0.53
Ptcd1Q8C2E4 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ptcd1Q8C2E4 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC18.37■□□□□ 0.53
Ptcd1Q8C2E4 Gm37444-201ENSMUST00000193605 439 ntBASIC18.37■□□□□ 0.53
Ptcd1Q8C2E4 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC18.37■□□□□ 0.53
Ptcd1Q8C2E4 AC153937.1-201ENSMUST00000218734 412 ntBASIC18.37■□□□□ 0.53
Ptcd1Q8C2E4 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ptcd1Q8C2E4 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Ptcd1Q8C2E4 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ptcd1Q8C2E4 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ptcd1Q8C2E4 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ptcd1Q8C2E4 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ptcd1Q8C2E4 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Ptcd1Q8C2E4 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ptcd1Q8C2E4 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ptcd1Q8C2E4 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ptcd1Q8C2E4 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ptcd1Q8C2E4 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ptcd1Q8C2E4 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC18.36■□□□□ 0.53
Ptcd1Q8C2E4 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC18.36■□□□□ 0.53
Ptcd1Q8C2E4 Gm14928-201ENSMUST00000120198 477 ntBASIC18.36■□□□□ 0.53
Ptcd1Q8C2E4 Gm15483-201ENSMUST00000120338 456 ntBASIC18.36■□□□□ 0.53
Ptcd1Q8C2E4 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ptcd1Q8C2E4 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Ptcd1Q8C2E4 Gm8116-201ENSMUST00000182917 1201 ntBASIC18.36■□□□□ 0.53
Ptcd1Q8C2E4 Gm27838-201ENSMUST00000184829 128 ntBASIC18.36■□□□□ 0.53
Ptcd1Q8C2E4 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Ptcd1Q8C2E4 Gm6473-201ENSMUST00000188572 1210 ntBASIC18.36■□□□□ 0.53
Ptcd1Q8C2E4 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ptcd1Q8C2E4 Gm3365-201ENSMUST00000216296 1480 ntBASIC18.36■□□□□ 0.53
Ptcd1Q8C2E4 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC18.36■□□□□ 0.53
Ptcd1Q8C2E4 AC130829.1-201ENSMUST00000221548 494 ntBASIC18.36■□□□□ 0.53
Ptcd1Q8C2E4 AC154532.1-201ENSMUST00000227860 965 ntBASIC18.36■□□□□ 0.53
Ptcd1Q8C2E4 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ptcd1Q8C2E4 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ptcd1Q8C2E4 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Ptcd1Q8C2E4 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ptcd1Q8C2E4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ptcd1Q8C2E4 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ptcd1Q8C2E4 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ptcd1Q8C2E4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ptcd1Q8C2E4 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ptcd1Q8C2E4 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.35■□□□□ 0.53
Ptcd1Q8C2E4 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ptcd1Q8C2E4 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC18.35■□□□□ 0.53
Ptcd1Q8C2E4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ptcd1Q8C2E4 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ptcd1Q8C2E4 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ptcd1Q8C2E4 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ptcd1Q8C2E4 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ptcd1Q8C2E4 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ptcd1Q8C2E4 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ptcd1Q8C2E4 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ptcd1Q8C2E4 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ptcd1Q8C2E4 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.35■□□□□ 0.53
Ptcd1Q8C2E4 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ptcd1Q8C2E4 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ptcd1Q8C2E4 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ptcd1Q8C2E4 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ptcd1Q8C2E4 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ptcd1Q8C2E4 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ptcd1Q8C2E4 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ptcd1Q8C2E4 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ptcd1Q8C2E4 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ptcd1Q8C2E4 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.34■□□□□ 0.53
Ptcd1Q8C2E4 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.34■□□□□ 0.53
Ptcd1Q8C2E4 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ptcd1Q8C2E4 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ptcd1Q8C2E4 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Ptcd1Q8C2E4 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC18.34■□□□□ 0.53
Ptcd1Q8C2E4 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ptcd1Q8C2E4 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ptcd1Q8C2E4 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ptcd1Q8C2E4 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ptcd1Q8C2E4 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ptcd1Q8C2E4 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ptcd1Q8C2E4 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ptcd1Q8C2E4 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ptcd1Q8C2E4 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ptcd1Q8C2E4 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ptcd1Q8C2E4 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ptcd1Q8C2E4 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ptcd1Q8C2E4 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ptcd1Q8C2E4 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ptcd1Q8C2E4 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ptcd1Q8C2E4 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ptcd1Q8C2E4 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ptcd1Q8C2E4 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ptcd1Q8C2E4 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.53
Ptcd1Q8C2E4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ptcd1Q8C2E4 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.33■□□□□ 0.52
Ptcd1Q8C2E4 Gm18766-201ENSMUST00000189811 808 ntBASIC18.33■□□□□ 0.52
Ptcd1Q8C2E4 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ptcd1Q8C2E4 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ptcd1Q8C2E4 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ptcd1Q8C2E4 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ptcd1Q8C2E4 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Ptcd1Q8C2E4 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
Ptcd1Q8C2E4 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms