Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.55■□□□□ 0.24
Trim47Q8C0E3 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Trim47Q8C0E3 Gm6973-201ENSMUST00000117080 721 ntBASIC16.55■□□□□ 0.24
Trim47Q8C0E3 Rprl2-201ENSMUST00000157150 290 ntBASIC16.55■□□□□ 0.24
Trim47Q8C0E3 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trim47Q8C0E3 Gm18889-201ENSMUST00000174284 929 ntBASIC16.55■□□□□ 0.24
Trim47Q8C0E3 Gm18057-201ENSMUST00000208220 503 ntBASIC16.55■□□□□ 0.24
Trim47Q8C0E3 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim47Q8C0E3 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Trim47Q8C0E3 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.55■□□□□ 0.24
Trim47Q8C0E3 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.55■□□□□ 0.24
Trim47Q8C0E3 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim47Q8C0E3 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim47Q8C0E3 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim47Q8C0E3 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim47Q8C0E3 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.55■□□□□ 0.24
Trim47Q8C0E3 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim47Q8C0E3 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim47Q8C0E3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim47Q8C0E3 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim47Q8C0E3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
Trim47Q8C0E3 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim47Q8C0E3 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trim47Q8C0E3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim47Q8C0E3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim47Q8C0E3 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim47Q8C0E3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim47Q8C0E3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.54■□□□□ 0.24
Trim47Q8C0E3 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim47Q8C0E3 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trim47Q8C0E3 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.54■□□□□ 0.24
Trim47Q8C0E3 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim47Q8C0E3 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim47Q8C0E3 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Trim47Q8C0E3 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Trim47Q8C0E3 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trim47Q8C0E3 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.54■□□□□ 0.24
Trim47Q8C0E3 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.54■□□□□ 0.24
Trim47Q8C0E3 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim47Q8C0E3 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim47Q8C0E3 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim47Q8C0E3 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Trim47Q8C0E3 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim47Q8C0E3 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim47Q8C0E3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim47Q8C0E3 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim47Q8C0E3 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim47Q8C0E3 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim47Q8C0E3 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim47Q8C0E3 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim47Q8C0E3 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim47Q8C0E3 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Mir6990-201ENSMUST00000183724 91 ntBASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim47Q8C0E3 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim47Q8C0E3 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim47Q8C0E3 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Trim47Q8C0E3 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim47Q8C0E3 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim47Q8C0E3 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Trim47Q8C0E3 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Trim47Q8C0E3 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim47Q8C0E3 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.52■□□□□ 0.24
Trim47Q8C0E3 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.52■□□□□ 0.24
Trim47Q8C0E3 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.52■□□□□ 0.24
Trim47Q8C0E3 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.52■□□□□ 0.24
Trim47Q8C0E3 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.52■□□□□ 0.24
Trim47Q8C0E3 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim47Q8C0E3 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim47Q8C0E3 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms