Protein–RNA interactions for Protein: Q8BVF4

Ccdc30, Coiled-coil domain-containing protein 30, mousemouse

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc30Q8BVF4 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ccdc30Q8BVF4 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc30Q8BVF4 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc30Q8BVF4 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc30Q8BVF4 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc30Q8BVF4 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc30Q8BVF4 Gm9385-201ENSMUST00000117563 472 ntBASIC19.27■□□□□ 0.68
Ccdc30Q8BVF4 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC19.27■□□□□ 0.68
Ccdc30Q8BVF4 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ccdc30Q8BVF4 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc30Q8BVF4 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc30Q8BVF4 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc30Q8BVF4 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc30Q8BVF4 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc30Q8BVF4 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC19.27■□□□□ 0.68
Ccdc30Q8BVF4 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC19.27■□□□□ 0.68
Ccdc30Q8BVF4 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC19.27■□□□□ 0.67
Ccdc30Q8BVF4 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc30Q8BVF4 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
Ccdc30Q8BVF4 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc30Q8BVF4 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC19.27■□□□□ 0.67
Ccdc30Q8BVF4 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Gm10154-201ENSMUST00000084445 354 ntBASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Gm43509-201ENSMUST00000196551 2594 ntBASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc30Q8BVF4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc30Q8BVF4 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ccdc30Q8BVF4 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc30Q8BVF4 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ccdc30Q8BVF4 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc30Q8BVF4 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc30Q8BVF4 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc30Q8BVF4 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc30Q8BVF4 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc30Q8BVF4 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC19.25■□□□□ 0.67
Ccdc30Q8BVF4 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC19.25■□□□□ 0.67
Ccdc30Q8BVF4 Trav13-3-201ENSMUST00000117226 336 ntBASIC19.25■□□□□ 0.67
Ccdc30Q8BVF4 Gm11779-201ENSMUST00000118541 368 ntBASIC19.25■□□□□ 0.67
Ccdc30Q8BVF4 Gm12260-201ENSMUST00000122447 411 ntBASIC19.25■□□□□ 0.67
Ccdc30Q8BVF4 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc30Q8BVF4 Gm8597-201ENSMUST00000191525 1109 ntBASIC19.25■□□□□ 0.67
Ccdc30Q8BVF4 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc30Q8BVF4 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ccdc30Q8BVF4 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc30Q8BVF4 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc30Q8BVF4 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc30Q8BVF4 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc30Q8BVF4 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc30Q8BVF4 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc30Q8BVF4 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Ccdc30Q8BVF4 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc30Q8BVF4 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc30Q8BVF4 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc30Q8BVF4 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc30Q8BVF4 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc30Q8BVF4 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc30Q8BVF4 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc30Q8BVF4 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc30Q8BVF4 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Ccdc30Q8BVF4 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc30Q8BVF4 Gm12892-201ENSMUST00000117367 1146 ntBASIC19.24■□□□□ 0.67
Ccdc30Q8BVF4 Gm16026-204ENSMUST00000162652 683 ntBASIC19.24■□□□□ 0.67
Ccdc30Q8BVF4 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc30Q8BVF4 Gm27301-201ENSMUST00000184012 127 ntBASIC19.24■□□□□ 0.67
Ccdc30Q8BVF4 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccdc30Q8BVF4 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc30Q8BVF4 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc30Q8BVF4 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC19.24■□□□□ 0.67
Ccdc30Q8BVF4 AC154572.2-201ENSMUST00000225105 997 ntBASIC19.24■□□□□ 0.67
Ccdc30Q8BVF4 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc30Q8BVF4 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms