Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm25287-201ENSMUST00000103846 110 ntBASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm22918-201ENSMUST00000103855 110 ntBASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap1Q8BTW8 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm13616-201ENSMUST00000120600 222 ntBASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap1Q8BTW8 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm22065-201ENSMUST00000103753 110 ntBASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm22066-201ENSMUST00000103761 110 ntBASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm24932-201ENSMUST00000103763 110 ntBASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm24115-201ENSMUST00000103799 110 ntBASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm22190-201ENSMUST00000103827 110 ntBASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm22191-201ENSMUST00000103831 110 ntBASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm24721-201ENSMUST00000103849 110 ntBASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm28018-201ENSMUST00000103869 110 ntBASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm26399-201ENSMUST00000103937 110 ntBASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm25349-201ENSMUST00000177728 110 ntBASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm23616-201ENSMUST00000177797 110 ntBASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm25871-201ENSMUST00000177816 110 ntBASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm24752-201ENSMUST00000178240 110 ntBASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm24496-201ENSMUST00000178287 110 ntBASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm25649-201ENSMUST00000178476 110 ntBASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm25548-201ENSMUST00000178681 110 ntBASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm23147-201ENSMUST00000178841 110 ntBASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm26095-201ENSMUST00000179270 110 ntBASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm22171-201ENSMUST00000179283 110 ntBASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm23936-201ENSMUST00000179354 110 ntBASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm22619-201ENSMUST00000179516 110 ntBASIC14.16□□□□□ -0.14
Cdk5rap1Q8BTW8 Gm25255-201ENSMUST00000179579 110 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms