Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sfr1Q8BP27 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sfr1Q8BP27 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sfr1Q8BP27 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sfr1Q8BP27 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sfr1Q8BP27 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sfr1Q8BP27 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.22■□□□□ 0.03
Sfr1Q8BP27 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sfr1Q8BP27 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.22■□□□□ 0.03
Sfr1Q8BP27 Gm12008-201ENSMUST00000117791 755 ntBASIC15.22■□□□□ 0.03
Sfr1Q8BP27 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sfr1Q8BP27 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.22■□□□□ 0.03
Sfr1Q8BP27 Gm5264-201ENSMUST00000190584 848 ntBASIC15.22■□□□□ 0.03
Sfr1Q8BP27 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.22■□□□□ 0.03
Sfr1Q8BP27 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sfr1Q8BP27 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.22■□□□□ 0.03
Sfr1Q8BP27 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.22■□□□□ 0.03
Sfr1Q8BP27 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sfr1Q8BP27 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sfr1Q8BP27 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sfr1Q8BP27 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sfr1Q8BP27 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sfr1Q8BP27 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sfr1Q8BP27 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sfr1Q8BP27 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.22■□□□□ 0.03
Sfr1Q8BP27 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Sfr1Q8BP27 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sfr1Q8BP27 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sfr1Q8BP27 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
Sfr1Q8BP27 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sfr1Q8BP27 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Sfr1Q8BP27 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sfr1Q8BP27 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sfr1Q8BP27 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.21■□□□□ 0.03
Sfr1Q8BP27 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sfr1Q8BP27 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.21■□□□□ 0.03
Sfr1Q8BP27 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sfr1Q8BP27 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sfr1Q8BP27 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sfr1Q8BP27 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sfr1Q8BP27 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sfr1Q8BP27 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sfr1Q8BP27 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sfr1Q8BP27 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sfr1Q8BP27 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sfr1Q8BP27 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Sfr1Q8BP27 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sfr1Q8BP27 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
Sfr1Q8BP27 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sfr1Q8BP27 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sfr1Q8BP27 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sfr1Q8BP27 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sfr1Q8BP27 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Sfr1Q8BP27 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sfr1Q8BP27 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sfr1Q8BP27 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sfr1Q8BP27 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sfr1Q8BP27 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sfr1Q8BP27 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.2■□□□□ 0.02
Sfr1Q8BP27 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.2■□□□□ 0.02
Sfr1Q8BP27 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sfr1Q8BP27 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.2■□□□□ 0.02
Sfr1Q8BP27 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sfr1Q8BP27 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sfr1Q8BP27 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sfr1Q8BP27 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.2■□□□□ 0.02
Sfr1Q8BP27 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sfr1Q8BP27 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Sfr1Q8BP27 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sfr1Q8BP27 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sfr1Q8BP27 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sfr1Q8BP27 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.2■□□□□ 0.02
Sfr1Q8BP27 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sfr1Q8BP27 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.2■□□□□ 0.02
Sfr1Q8BP27 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sfr1Q8BP27 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sfr1Q8BP27 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sfr1Q8BP27 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sfr1Q8BP27 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sfr1Q8BP27 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.19■□□□□ 0.02
Sfr1Q8BP27 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sfr1Q8BP27 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sfr1Q8BP27 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sfr1Q8BP27 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sfr1Q8BP27 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sfr1Q8BP27 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sfr1Q8BP27 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sfr1Q8BP27 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sfr1Q8BP27 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sfr1Q8BP27 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sfr1Q8BP27 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.19■□□□□ 0.02
Sfr1Q8BP27 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Sfr1Q8BP27 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sfr1Q8BP27 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.19■□□□□ 0.02
Sfr1Q8BP27 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sfr1Q8BP27 Gm13597-201ENSMUST00000121239 375 ntBASIC15.19■□□□□ 0.02
Sfr1Q8BP27 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.19■□□□□ 0.02
Sfr1Q8BP27 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.19■□□□□ 0.02
Sfr1Q8BP27 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.19■□□□□ 0.02
Sfr1Q8BP27 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms