Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Samm50Q8BGH2 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Samm50Q8BGH2 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Samm50Q8BGH2 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Samm50Q8BGH2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Samm50Q8BGH2 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Samm50Q8BGH2 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Samm50Q8BGH2 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Samm50Q8BGH2 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Samm50Q8BGH2 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Samm50Q8BGH2 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Samm50Q8BGH2 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Samm50Q8BGH2 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC17.54■□□□□ 0.4
Samm50Q8BGH2 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
Samm50Q8BGH2 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Samm50Q8BGH2 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Samm50Q8BGH2 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Samm50Q8BGH2 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Samm50Q8BGH2 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Samm50Q8BGH2 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Samm50Q8BGH2 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.54■□□□□ 0.4
Samm50Q8BGH2 AW822252-206ENSMUST00000208904 237 ntBASIC17.54■□□□□ 0.4
Samm50Q8BGH2 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.54■□□□□ 0.4
Samm50Q8BGH2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Samm50Q8BGH2 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Samm50Q8BGH2 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Samm50Q8BGH2 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Samm50Q8BGH2 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Samm50Q8BGH2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Samm50Q8BGH2 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Samm50Q8BGH2 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Samm50Q8BGH2 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Samm50Q8BGH2 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Samm50Q8BGH2 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Samm50Q8BGH2 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Samm50Q8BGH2 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Samm50Q8BGH2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Samm50Q8BGH2 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Samm50Q8BGH2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Samm50Q8BGH2 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Samm50Q8BGH2 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Samm50Q8BGH2 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Samm50Q8BGH2 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Samm50Q8BGH2 Gm1401-201ENSMUST00000122048 772 ntBASIC17.53■□□□□ 0.4
Samm50Q8BGH2 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.53■□□□□ 0.4
Samm50Q8BGH2 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Samm50Q8BGH2 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.53■□□□□ 0.4
Samm50Q8BGH2 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.53■□□□□ 0.4
Samm50Q8BGH2 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.53■□□□□ 0.4
Samm50Q8BGH2 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Samm50Q8BGH2 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.53■□□□□ 0.4
Samm50Q8BGH2 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.53■□□□□ 0.4
Samm50Q8BGH2 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Samm50Q8BGH2 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Samm50Q8BGH2 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Samm50Q8BGH2 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Samm50Q8BGH2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.53■□□□□ 0.4
Samm50Q8BGH2 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Samm50Q8BGH2 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.53■□□□□ 0.4
Samm50Q8BGH2 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Samm50Q8BGH2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Samm50Q8BGH2 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Samm50Q8BGH2 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Samm50Q8BGH2 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.52■□□□□ 0.4
Samm50Q8BGH2 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
Samm50Q8BGH2 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Samm50Q8BGH2 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Samm50Q8BGH2 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.52■□□□□ 0.4
Samm50Q8BGH2 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Samm50Q8BGH2 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Samm50Q8BGH2 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Samm50Q8BGH2 Gm15358-201ENSMUST00000119249 520 ntBASIC17.52■□□□□ 0.4
Samm50Q8BGH2 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.52■□□□□ 0.4
Samm50Q8BGH2 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.52■□□□□ 0.4
Samm50Q8BGH2 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.52■□□□□ 0.4
Samm50Q8BGH2 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Samm50Q8BGH2 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Samm50Q8BGH2 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Samm50Q8BGH2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Samm50Q8BGH2 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Samm50Q8BGH2 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Samm50Q8BGH2 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Samm50Q8BGH2 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Samm50Q8BGH2 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Samm50Q8BGH2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Samm50Q8BGH2 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Samm50Q8BGH2 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Samm50Q8BGH2 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Samm50Q8BGH2 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Samm50Q8BGH2 Gm13036-201ENSMUST00000117799 748 ntBASIC17.51■□□□□ 0.39
Samm50Q8BGH2 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Samm50Q8BGH2 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Samm50Q8BGH2 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.51■□□□□ 0.39
Samm50Q8BGH2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Samm50Q8BGH2 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Samm50Q8BGH2 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.51■□□□□ 0.39
Samm50Q8BGH2 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Samm50Q8BGH2 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Samm50Q8BGH2 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC17.51■□□□□ 0.39
Samm50Q8BGH2 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms