Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox21Q811W0 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox21Q811W0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.24□□□□□ -0.45
Sox21Q811W0 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.24□□□□□ -0.45
Sox21Q811W0 Gm15427-201ENSMUST00000117288 531 ntBASIC12.24□□□□□ -0.45
Sox21Q811W0 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.24□□□□□ -0.45
Sox21Q811W0 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.24□□□□□ -0.45
Sox21Q811W0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.24□□□□□ -0.45
Sox21Q811W0 Gm11745-201ENSMUST00000121669 448 ntBASIC12.24□□□□□ -0.45
Sox21Q811W0 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox21Q811W0 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox21Q811W0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox21Q811W0 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox21Q811W0 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Sox21Q811W0 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.24□□□□□ -0.45
Sox21Q811W0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.24□□□□□ -0.45
Sox21Q811W0 Gm44335-201ENSMUST00000196879 141 ntBASIC12.24□□□□□ -0.45
Sox21Q811W0 Gm44297-201ENSMUST00000198304 141 ntBASIC12.24□□□□□ -0.45
Sox21Q811W0 Gm44346-201ENSMUST00000198851 141 ntBASIC12.24□□□□□ -0.45
Sox21Q811W0 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.24□□□□□ -0.45
Sox21Q811W0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.24□□□□□ -0.45
Sox21Q811W0 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Sox21Q811W0 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox21Q811W0 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.24□□□□□ -0.45
Sox21Q811W0 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox21Q811W0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox21Q811W0 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox21Q811W0 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox21Q811W0 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox21Q811W0 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox21Q811W0 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox21Q811W0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox21Q811W0 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox21Q811W0 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox21Q811W0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox21Q811W0 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Sox21Q811W0 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox21Q811W0 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.23□□□□□ -0.45
Sox21Q811W0 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox21Q811W0 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox21Q811W0 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox21Q811W0 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox21Q811W0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Sox21Q811W0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox21Q811W0 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox21Q811W0 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox21Q811W0 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox21Q811W0 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox21Q811W0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox21Q811W0 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox21Q811W0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox21Q811W0 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Sox21Q811W0 Auts2-212ENSMUST00000178555 309 ntBASIC12.23□□□□□ -0.45
Sox21Q811W0 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox21Q811W0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox21Q811W0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox21Q811W0 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.23□□□□□ -0.45
Sox21Q811W0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.23□□□□□ -0.45
Sox21Q811W0 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Sox21Q811W0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox21Q811W0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox21Q811W0 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Sox21Q811W0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Sox21Q811W0 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox21Q811W0 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox21Q811W0 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox21Q811W0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox21Q811W0 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox21Q811W0 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sox21Q811W0 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Sox21Q811W0 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.23□□□□□ -0.45
Sox21Q811W0 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox21Q811W0 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox21Q811W0 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox21Q811W0 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox21Q811W0 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox21Q811W0 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox21Q811W0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox21Q811W0 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox21Q811W0 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox21Q811W0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox21Q811W0 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.22□□□□□ -0.45
Sox21Q811W0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox21Q811W0 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Sox21Q811W0 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox21Q811W0 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox21Q811W0 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.22□□□□□ -0.45
Sox21Q811W0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.22□□□□□ -0.45
Sox21Q811W0 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox21Q811W0 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.22□□□□□ -0.45
Sox21Q811W0 Gm27494-201ENSMUST00000184735 189 ntBASIC12.22□□□□□ -0.45
Sox21Q811W0 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.22□□□□□ -0.45
Sox21Q811W0 Thap2-203ENSMUST00000218989 527 ntBASIC12.22□□□□□ -0.45
Sox21Q811W0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Sox21Q811W0 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox21Q811W0 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox21Q811W0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Sox21Q811W0 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox21Q811W0 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox21Q811W0 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms