Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim50Q810I2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim50Q810I2 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Trim50Q810I2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim50Q810I2 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim50Q810I2 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim50Q810I2 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim50Q810I2 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim50Q810I2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim50Q810I2 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim50Q810I2 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trim50Q810I2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Trim50Q810I2 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim50Q810I2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim50Q810I2 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.57□□□□□ -0.08
Trim50Q810I2 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.57□□□□□ -0.08
Trim50Q810I2 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.57□□□□□ -0.08
Trim50Q810I2 Psmb5-202ENSMUST00000227257 622 ntBASIC14.57□□□□□ -0.08
Trim50Q810I2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim50Q810I2 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim50Q810I2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim50Q810I2 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim50Q810I2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim50Q810I2 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trim50Q810I2 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim50Q810I2 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim50Q810I2 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim50Q810I2 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim50Q810I2 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim50Q810I2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim50Q810I2 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Trim50Q810I2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim50Q810I2 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trim50Q810I2 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim50Q810I2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim50Q810I2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim50Q810I2 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim50Q810I2 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Trim50Q810I2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim50Q810I2 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.56□□□□□ -0.08
Trim50Q810I2 Gm14140-201ENSMUST00000119999 995 ntBASIC14.56□□□□□ -0.08
Trim50Q810I2 Gm13597-201ENSMUST00000121239 375 ntBASIC14.56□□□□□ -0.08
Trim50Q810I2 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.56□□□□□ -0.08
Trim50Q810I2 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim50Q810I2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.56□□□□□ -0.08
Trim50Q810I2 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trim50Q810I2 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.56□□□□□ -0.08
Trim50Q810I2 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim50Q810I2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim50Q810I2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim50Q810I2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim50Q810I2 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.56□□□□□ -0.08
Trim50Q810I2 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trim50Q810I2 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim50Q810I2 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim50Q810I2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
Trim50Q810I2 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim50Q810I2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim50Q810I2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trim50Q810I2 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim50Q810I2 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim50Q810I2 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim50Q810I2 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
Trim50Q810I2 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim50Q810I2 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim50Q810I2 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim50Q810I2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim50Q810I2 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Trim50Q810I2 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim50Q810I2 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim50Q810I2 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim50Q810I2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim50Q810I2 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim50Q810I2 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim50Q810I2 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim50Q810I2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
Trim50Q810I2 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Trim50Q810I2 Gm1401-201ENSMUST00000122048 772 ntBASIC14.55□□□□□ -0.08
Trim50Q810I2 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim50Q810I2 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim50Q810I2 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim50Q810I2 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim50Q810I2 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.55□□□□□ -0.08
Trim50Q810I2 Gm43767-201ENSMUST00000198933 381 ntBASIC14.55□□□□□ -0.08
Trim50Q810I2 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim50Q810I2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trim50Q810I2 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trim50Q810I2 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim50Q810I2 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim50Q810I2 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim50Q810I2 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim50Q810I2 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim50Q810I2 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim50Q810I2 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim50Q810I2 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim50Q810I2 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim50Q810I2 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trim50Q810I2 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
Trim50Q810I2 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim50Q810I2 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms