Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trnp1Q80ZI1 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.74■□□□□ 0.27
Trnp1Q80ZI1 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trnp1Q80ZI1 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trnp1Q80ZI1 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trnp1Q80ZI1 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trnp1Q80ZI1 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trnp1Q80ZI1 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trnp1Q80ZI1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trnp1Q80ZI1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trnp1Q80ZI1 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trnp1Q80ZI1 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.73■□□□□ 0.27
Trnp1Q80ZI1 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trnp1Q80ZI1 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trnp1Q80ZI1 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
Trnp1Q80ZI1 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trnp1Q80ZI1 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trnp1Q80ZI1 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trnp1Q80ZI1 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trnp1Q80ZI1 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trnp1Q80ZI1 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.73■□□□□ 0.27
Trnp1Q80ZI1 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trnp1Q80ZI1 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.73■□□□□ 0.27
Trnp1Q80ZI1 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.73■□□□□ 0.27
Trnp1Q80ZI1 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC16.73■□□□□ 0.27
Trnp1Q80ZI1 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.73■□□□□ 0.27
Trnp1Q80ZI1 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trnp1Q80ZI1 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trnp1Q80ZI1 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.73■□□□□ 0.27
Trnp1Q80ZI1 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trnp1Q80ZI1 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trnp1Q80ZI1 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trnp1Q80ZI1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trnp1Q80ZI1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trnp1Q80ZI1 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trnp1Q80ZI1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trnp1Q80ZI1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trnp1Q80ZI1 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trnp1Q80ZI1 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trnp1Q80ZI1 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trnp1Q80ZI1 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trnp1Q80ZI1 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trnp1Q80ZI1 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trnp1Q80ZI1 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trnp1Q80ZI1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Trnp1Q80ZI1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trnp1Q80ZI1 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trnp1Q80ZI1 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trnp1Q80ZI1 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trnp1Q80ZI1 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.72■□□□□ 0.27
Trnp1Q80ZI1 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.72■□□□□ 0.27
Trnp1Q80ZI1 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trnp1Q80ZI1 Gm27701-201ENSMUST00000184498 110 ntBASIC16.72■□□□□ 0.27
Trnp1Q80ZI1 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.72■□□□□ 0.27
Trnp1Q80ZI1 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trnp1Q80ZI1 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trnp1Q80ZI1 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trnp1Q80ZI1 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trnp1Q80ZI1 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trnp1Q80ZI1 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trnp1Q80ZI1 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trnp1Q80ZI1 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trnp1Q80ZI1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trnp1Q80ZI1 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trnp1Q80ZI1 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trnp1Q80ZI1 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trnp1Q80ZI1 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trnp1Q80ZI1 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trnp1Q80ZI1 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trnp1Q80ZI1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trnp1Q80ZI1 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trnp1Q80ZI1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trnp1Q80ZI1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trnp1Q80ZI1 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trnp1Q80ZI1 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trnp1Q80ZI1 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trnp1Q80ZI1 Gm12585-201ENSMUST00000117307 290 ntBASIC16.71■□□□□ 0.27
Trnp1Q80ZI1 Gm8749-201ENSMUST00000117737 331 ntBASIC16.71■□□□□ 0.27
Trnp1Q80ZI1 Gm11425-201ENSMUST00000119608 498 ntBASIC16.71■□□□□ 0.27
Trnp1Q80ZI1 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trnp1Q80ZI1 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trnp1Q80ZI1 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC16.71■□□□□ 0.27
Trnp1Q80ZI1 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.71■□□□□ 0.27
Trnp1Q80ZI1 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.71■□□□□ 0.27
Trnp1Q80ZI1 AA619741-201ENSMUST00000195095 646 ntBASIC16.71■□□□□ 0.27
Trnp1Q80ZI1 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Trnp1Q80ZI1 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trnp1Q80ZI1 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trnp1Q80ZI1 Gm9396-201ENSMUST00000076703 567 ntBASIC16.71■□□□□ 0.27
Trnp1Q80ZI1 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Trnp1Q80ZI1 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trnp1Q80ZI1 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trnp1Q80ZI1 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Trnp1Q80ZI1 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trnp1Q80ZI1 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trnp1Q80ZI1 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trnp1Q80ZI1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trnp1Q80ZI1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trnp1Q80ZI1 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trnp1Q80ZI1 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms