Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Prpf40bQ80W14 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Prpf40bQ80W14 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Prpf40bQ80W14 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Prpf40bQ80W14 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Prpf40bQ80W14 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Prpf40bQ80W14 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Prpf40bQ80W14 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Prpf40bQ80W14 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Prpf40bQ80W14 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf40bQ80W14 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf40bQ80W14 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf40bQ80W14 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf40bQ80W14 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf40bQ80W14 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.26■□□□□ 0.35
Prpf40bQ80W14 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.26■□□□□ 0.35
Prpf40bQ80W14 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC17.26■□□□□ 0.35
Prpf40bQ80W14 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf40bQ80W14 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.26■□□□□ 0.35
Prpf40bQ80W14 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.26■□□□□ 0.35
Prpf40bQ80W14 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf40bQ80W14 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Prpf40bQ80W14 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf40bQ80W14 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.26■□□□□ 0.35
Prpf40bQ80W14 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf40bQ80W14 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Prpf40bQ80W14 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.26■□□□□ 0.35
Prpf40bQ80W14 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf40bQ80W14 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.26■□□□□ 0.35
Prpf40bQ80W14 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf40bQ80W14 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.25■□□□□ 0.35
Prpf40bQ80W14 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf40bQ80W14 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf40bQ80W14 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf40bQ80W14 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Prpf40bQ80W14 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf40bQ80W14 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf40bQ80W14 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf40bQ80W14 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.25■□□□□ 0.35
Prpf40bQ80W14 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf40bQ80W14 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Prpf40bQ80W14 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.25■□□□□ 0.35
Prpf40bQ80W14 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf40bQ80W14 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC17.25■□□□□ 0.35
Prpf40bQ80W14 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.25■□□□□ 0.35
Prpf40bQ80W14 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Prpf40bQ80W14 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.25■□□□□ 0.35
Prpf40bQ80W14 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf40bQ80W14 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf40bQ80W14 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf40bQ80W14 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf40bQ80W14 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf40bQ80W14 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf40bQ80W14 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.25■□□□□ 0.35
Prpf40bQ80W14 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf40bQ80W14 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf40bQ80W14 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf40bQ80W14 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf40bQ80W14 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Prpf40bQ80W14 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Prpf40bQ80W14 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf40bQ80W14 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf40bQ80W14 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf40bQ80W14 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf40bQ80W14 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Prpf40bQ80W14 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf40bQ80W14 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf40bQ80W14 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Prpf40bQ80W14 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf40bQ80W14 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf40bQ80W14 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.24■□□□□ 0.35
Prpf40bQ80W14 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf40bQ80W14 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf40bQ80W14 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf40bQ80W14 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf40bQ80W14 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf40bQ80W14 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf40bQ80W14 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf40bQ80W14 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf40bQ80W14 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.23■□□□□ 0.35
Prpf40bQ80W14 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC17.23■□□□□ 0.35
Prpf40bQ80W14 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.23■□□□□ 0.35
Prpf40bQ80W14 Gm27989-201ENSMUST00000184721 107 ntBASIC17.23■□□□□ 0.35
Prpf40bQ80W14 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf40bQ80W14 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.23■□□□□ 0.35
Prpf40bQ80W14 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Prpf40bQ80W14 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf40bQ80W14 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Prpf40bQ80W14 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf40bQ80W14 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC17.23■□□□□ 0.35
Prpf40bQ80W14 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf40bQ80W14 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Prpf40bQ80W14 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf40bQ80W14 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf40bQ80W14 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf40bQ80W14 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf40bQ80W14 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf40bQ80W14 Gm25287-201ENSMUST00000103846 110 ntBASIC17.22■□□□□ 0.35
Prpf40bQ80W14 Gm22918-201ENSMUST00000103855 110 ntBASIC17.22■□□□□ 0.35
Prpf40bQ80W14 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms