Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pif1Q80SX8 Gm6973-201ENSMUST00000117080 721 ntBASIC13.81□□□□□ -0.2
Pif1Q80SX8 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.81□□□□□ -0.2
Pif1Q80SX8 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.81□□□□□ -0.2
Pif1Q80SX8 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.81□□□□□ -0.2
Pif1Q80SX8 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.81□□□□□ -0.2
Pif1Q80SX8 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.81□□□□□ -0.2
Pif1Q80SX8 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.81□□□□□ -0.2
Pif1Q80SX8 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.81□□□□□ -0.2
Pif1Q80SX8 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pif1Q80SX8 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pif1Q80SX8 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pif1Q80SX8 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pif1Q80SX8 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pif1Q80SX8 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pif1Q80SX8 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pif1Q80SX8 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pif1Q80SX8 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pif1Q80SX8 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pif1Q80SX8 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pif1Q80SX8 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pif1Q80SX8 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pif1Q80SX8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.8□□□□□ -0.2
Pif1Q80SX8 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.8□□□□□ -0.2
Pif1Q80SX8 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pif1Q80SX8 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.8□□□□□ -0.2
Pif1Q80SX8 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pif1Q80SX8 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.8□□□□□ -0.2
Pif1Q80SX8 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Pif1Q80SX8 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pif1Q80SX8 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pif1Q80SX8 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pif1Q80SX8 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pif1Q80SX8 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pif1Q80SX8 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.79□□□□□ -0.2
Pif1Q80SX8 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pif1Q80SX8 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pif1Q80SX8 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pif1Q80SX8 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.79□□□□□ -0.2
Pif1Q80SX8 Gm11543-201ENSMUST00000120758 370 ntBASIC13.79□□□□□ -0.2
Pif1Q80SX8 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pif1Q80SX8 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pif1Q80SX8 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pif1Q80SX8 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pif1Q80SX8 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.79□□□□□ -0.2
Pif1Q80SX8 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Pif1Q80SX8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pif1Q80SX8 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pif1Q80SX8 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pif1Q80SX8 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.79□□□□□ -0.2
Pif1Q80SX8 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.79□□□□□ -0.2
Pif1Q80SX8 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pif1Q80SX8 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pif1Q80SX8 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms