Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.88■□□□□ 0.45
Npc1l1Q6T3U4 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.45
Npc1l1Q6T3U4 Gm27430-201ENSMUST00000184585 107 ntBASIC17.88■□□□□ 0.45
Npc1l1Q6T3U4 Gm44333-201ENSMUST00000197168 107 ntBASIC17.88■□□□□ 0.45
Npc1l1Q6T3U4 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Npc1l1Q6T3U4 Gm5779-201ENSMUST00000218467 910 ntBASIC17.88■□□□□ 0.45
Npc1l1Q6T3U4 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Npc1l1Q6T3U4 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Npc1l1Q6T3U4 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Npc1l1Q6T3U4 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Npc1l1Q6T3U4 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Npc1l1Q6T3U4 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Npc1l1Q6T3U4 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Npc1l1Q6T3U4 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.87■□□□□ 0.45
Npc1l1Q6T3U4 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.87■□□□□ 0.45
Npc1l1Q6T3U4 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.87■□□□□ 0.45
Npc1l1Q6T3U4 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Npc1l1Q6T3U4 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Npc1l1Q6T3U4 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.87■□□□□ 0.45
Npc1l1Q6T3U4 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Npc1l1Q6T3U4 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.87■□□□□ 0.45
Npc1l1Q6T3U4 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.87■□□□□ 0.45
Npc1l1Q6T3U4 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Npc1l1Q6T3U4 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.87■□□□□ 0.45
Npc1l1Q6T3U4 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.87■□□□□ 0.45
Npc1l1Q6T3U4 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Npc1l1Q6T3U4 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Npc1l1Q6T3U4 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.87■□□□□ 0.45
Npc1l1Q6T3U4 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
Npc1l1Q6T3U4 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Npc1l1Q6T3U4 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.87■□□□□ 0.45
Npc1l1Q6T3U4 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Npc1l1Q6T3U4 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Npc1l1Q6T3U4 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.87■□□□□ 0.45
Npc1l1Q6T3U4 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.87■□□□□ 0.45
Npc1l1Q6T3U4 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Npc1l1Q6T3U4 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Npc1l1Q6T3U4 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Npc1l1Q6T3U4 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Npc1l1Q6T3U4 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Npc1l1Q6T3U4 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Npc1l1Q6T3U4 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.85■□□□□ 0.45
Npc1l1Q6T3U4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Npc1l1Q6T3U4 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.85■□□□□ 0.45
Npc1l1Q6T3U4 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Npc1l1Q6T3U4 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Npc1l1Q6T3U4 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.85■□□□□ 0.45
Npc1l1Q6T3U4 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Npc1l1Q6T3U4 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.85■□□□□ 0.45
Npc1l1Q6T3U4 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Npc1l1Q6T3U4 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Npc1l1Q6T3U4 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Npc1l1Q6T3U4 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Npc1l1Q6T3U4 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Npc1l1Q6T3U4 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Npc1l1Q6T3U4 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Npc1l1Q6T3U4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Npc1l1Q6T3U4 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Npc1l1Q6T3U4 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Npc1l1Q6T3U4 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Npc1l1Q6T3U4 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Npc1l1Q6T3U4 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms