Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Smchd1Q6P5D8 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smchd1Q6P5D8 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smchd1Q6P5D8 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smchd1Q6P5D8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smchd1Q6P5D8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Smchd1Q6P5D8 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smchd1Q6P5D8 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Smchd1Q6P5D8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smchd1Q6P5D8 Carlr-201ENSMUST00000181515 2574 ntBASIC16.34■□□□□ 0.21
Smchd1Q6P5D8 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Smchd1Q6P5D8 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.34■□□□□ 0.21
Smchd1Q6P5D8 Gm27680-201ENSMUST00000184192 160 ntBASIC16.34■□□□□ 0.21
Smchd1Q6P5D8 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smchd1Q6P5D8 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smchd1Q6P5D8 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smchd1Q6P5D8 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.34■□□□□ 0.21
Smchd1Q6P5D8 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smchd1Q6P5D8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smchd1Q6P5D8 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smchd1Q6P5D8 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Smchd1Q6P5D8 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.33■□□□□ 0.21
Smchd1Q6P5D8 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Smchd1Q6P5D8 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Smchd1Q6P5D8 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smchd1Q6P5D8 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.21
Smchd1Q6P5D8 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smchd1Q6P5D8 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smchd1Q6P5D8 Gm27306-201ENSMUST00000183970 107 ntBASIC16.33■□□□□ 0.21
Smchd1Q6P5D8 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Smchd1Q6P5D8 Gm37230-201ENSMUST00000194491 818 ntBASIC16.33■□□□□ 0.21
Smchd1Q6P5D8 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.33■□□□□ 0.21
Smchd1Q6P5D8 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.33■□□□□ 0.21
Smchd1Q6P5D8 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Smchd1Q6P5D8 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Smchd1Q6P5D8 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smchd1Q6P5D8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Smchd1Q6P5D8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smchd1Q6P5D8 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smchd1Q6P5D8 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smchd1Q6P5D8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smchd1Q6P5D8 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smchd1Q6P5D8 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smchd1Q6P5D8 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smchd1Q6P5D8 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smchd1Q6P5D8 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Smchd1Q6P5D8 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smchd1Q6P5D8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.33■□□□□ 0.2
Smchd1Q6P5D8 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.33■□□□□ 0.2
Smchd1Q6P5D8 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Smchd1Q6P5D8 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.33■□□□□ 0.2
Smchd1Q6P5D8 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smchd1Q6P5D8 Gm38225-201ENSMUST00000194001 393 ntBASIC16.33■□□□□ 0.2
Smchd1Q6P5D8 Gm18049-201ENSMUST00000208909 581 ntBASIC16.33■□□□□ 0.2
Smchd1Q6P5D8 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smchd1Q6P5D8 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smchd1Q6P5D8 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smchd1Q6P5D8 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.32■□□□□ 0.2
Smchd1Q6P5D8 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.32■□□□□ 0.2
Smchd1Q6P5D8 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Smchd1Q6P5D8 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smchd1Q6P5D8 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smchd1Q6P5D8 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smchd1Q6P5D8 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smchd1Q6P5D8 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smchd1Q6P5D8 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smchd1Q6P5D8 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.32■□□□□ 0.2
Smchd1Q6P5D8 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Smchd1Q6P5D8 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smchd1Q6P5D8 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smchd1Q6P5D8 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.32■□□□□ 0.2
Smchd1Q6P5D8 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smchd1Q6P5D8 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smchd1Q6P5D8 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.32■□□□□ 0.2
Smchd1Q6P5D8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smchd1Q6P5D8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.32■□□□□ 0.2
Smchd1Q6P5D8 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smchd1Q6P5D8 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smchd1Q6P5D8 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smchd1Q6P5D8 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smchd1Q6P5D8 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smchd1Q6P5D8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Smchd1Q6P5D8 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smchd1Q6P5D8 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.31■□□□□ 0.2
Smchd1Q6P5D8 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Smchd1Q6P5D8 Gm24158-201ENSMUST00000175263 71 ntBASIC16.31■□□□□ 0.2
Smchd1Q6P5D8 Gm18766-201ENSMUST00000189811 808 ntBASIC16.31■□□□□ 0.2
Smchd1Q6P5D8 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smchd1Q6P5D8 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smchd1Q6P5D8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smchd1Q6P5D8 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Smchd1Q6P5D8 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smchd1Q6P5D8 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smchd1Q6P5D8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Smchd1Q6P5D8 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.31■□□□□ 0.2
Smchd1Q6P5D8 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smchd1Q6P5D8 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smchd1Q6P5D8 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.31■□□□□ 0.2
Smchd1Q6P5D8 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC16.31■□□□□ 0.2
Smchd1Q6P5D8 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms