Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Gm27631-201ENSMUST00000184163 466 ntBASIC17.37■□□□□ 0.37
Scaf8Q6DID3 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC17.37■□□□□ 0.37
Scaf8Q6DID3 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Scaf8Q6DID3 Gm5035-201ENSMUST00000215581 927 ntBASIC17.37■□□□□ 0.37
Scaf8Q6DID3 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scaf8Q6DID3 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Scaf8Q6DID3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scaf8Q6DID3 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Scaf8Q6DID3 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.37■□□□□ 0.37
Scaf8Q6DID3 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Scaf8Q6DID3 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scaf8Q6DID3 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.37■□□□□ 0.37
Scaf8Q6DID3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scaf8Q6DID3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scaf8Q6DID3 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Scaf8Q6DID3 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scaf8Q6DID3 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scaf8Q6DID3 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scaf8Q6DID3 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Scaf8Q6DID3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scaf8Q6DID3 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Scaf8Q6DID3 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scaf8Q6DID3 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scaf8Q6DID3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scaf8Q6DID3 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scaf8Q6DID3 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scaf8Q6DID3 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC17.36■□□□□ 0.37
Scaf8Q6DID3 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC17.36■□□□□ 0.37
Scaf8Q6DID3 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scaf8Q6DID3 Gm21156-201ENSMUST00000189693 869 ntBASIC17.36■□□□□ 0.37
Scaf8Q6DID3 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.36■□□□□ 0.37
Scaf8Q6DID3 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scaf8Q6DID3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scaf8Q6DID3 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scaf8Q6DID3 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scaf8Q6DID3 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scaf8Q6DID3 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.36■□□□□ 0.37
Scaf8Q6DID3 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scaf8Q6DID3 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Scaf8Q6DID3 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Scaf8Q6DID3 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Scaf8Q6DID3 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Scaf8Q6DID3 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scaf8Q6DID3 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Gm29310-201ENSMUST00000185468 696 ntBASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Gm21825-201ENSMUST00000185728 696 ntBASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Gm29109-201ENSMUST00000185895 696 ntBASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Gm21896-201ENSMUST00000186520 696 ntBASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Gm21873-201ENSMUST00000186728 696 ntBASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Gm21794-201ENSMUST00000187056 696 ntBASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Gm21880-201ENSMUST00000187275 696 ntBASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Gm21826-201ENSMUST00000187451 696 ntBASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Gm21198-201ENSMUST00000188393 696 ntBASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Gm21749-201ENSMUST00000189343 696 ntBASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Gm21901-201ENSMUST00000189568 696 ntBASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Gm29424-201ENSMUST00000189716 696 ntBASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Gm28599-201ENSMUST00000189838 694 ntBASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Gm21867-201ENSMUST00000189917 696 ntBASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Gm29269-201ENSMUST00000190087 696 ntBASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Gm21722-201ENSMUST00000190153 696 ntBASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Gm28423-201ENSMUST00000190701 696 ntBASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Gm21899-201ENSMUST00000190745 696 ntBASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Gm21910-201ENSMUST00000191163 696 ntBASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Gm21849-201ENSMUST00000191571 696 ntBASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Gm28678-201ENSMUST00000191593 696 ntBASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Gm20910-201ENSMUST00000193268 696 ntBASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Gm21871-201ENSMUST00000194621 696 ntBASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scaf8Q6DID3 AC131068.2-201ENSMUST00000226175 1453 ntBASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scaf8Q6DID3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scaf8Q6DID3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scaf8Q6DID3 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scaf8Q6DID3 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scaf8Q6DID3 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scaf8Q6DID3 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scaf8Q6DID3 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Scaf8Q6DID3 Gm15806-201ENSMUST00000120696 955 ntBASIC17.34■□□□□ 0.37
Scaf8Q6DID3 Gm6222-201ENSMUST00000120787 396 ntBASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms