Protein–RNA interactions for Protein: Q66JQ7

Knl1, Kinetochore scaffold 1, mousemouse

Predictions only

Length 1,612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Knl1Q66JQ7 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Knl1Q66JQ7 AC154806.6-201ENSMUST00000228192 202 ntBASIC20.71■□□□□ 0.91
Knl1Q66JQ7 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Knl1Q66JQ7 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Knl1Q66JQ7 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Knl1Q66JQ7 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Knl1Q66JQ7 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Knl1Q66JQ7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.7■□□□□ 0.9
Knl1Q66JQ7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.7■□□□□ 0.9
Knl1Q66JQ7 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Knl1Q66JQ7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Knl1Q66JQ7 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC20.7■□□□□ 0.9
Knl1Q66JQ7 Gm29127-201ENSMUST00000188304 517 ntBASIC20.7■□□□□ 0.9
Knl1Q66JQ7 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC20.7■□□□□ 0.9
Knl1Q66JQ7 AC140451.2-201ENSMUST00000228030 664 ntBASIC20.7■□□□□ 0.9
Knl1Q66JQ7 AC125117.1-201ENSMUST00000228121 468 ntBASIC20.7■□□□□ 0.9
Knl1Q66JQ7 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Knl1Q66JQ7 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Knl1Q66JQ7 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Knl1Q66JQ7 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Knl1Q66JQ7 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Knl1Q66JQ7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Knl1Q66JQ7 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Knl1Q66JQ7 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Knl1Q66JQ7 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Knl1Q66JQ7 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Knl1Q66JQ7 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Knl1Q66JQ7 Gm24196-201ENSMUST00000179161 110 ntBASIC20.69■□□□□ 0.9
Knl1Q66JQ7 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Knl1Q66JQ7 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Knl1Q66JQ7 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Knl1Q66JQ7 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Knl1Q66JQ7 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Knl1Q66JQ7 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC20.69■□□□□ 0.9
Knl1Q66JQ7 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Knl1Q66JQ7 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Knl1Q66JQ7 Gm37166-201ENSMUST00000195473 2474 ntBASIC20.68■□□□□ 0.9
Knl1Q66JQ7 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Knl1Q66JQ7 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Knl1Q66JQ7 AC122459.1-201ENSMUST00000228373 885 ntBASIC20.68■□□□□ 0.9
Knl1Q66JQ7 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Knl1Q66JQ7 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Knl1Q66JQ7 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Knl1Q66JQ7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Knl1Q66JQ7 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC20.68■□□□□ 0.9
Knl1Q66JQ7 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Knl1Q66JQ7 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Knl1Q66JQ7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Knl1Q66JQ7 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Knl1Q66JQ7 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Knl1Q66JQ7 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Knl1Q66JQ7 Gm42853-201ENSMUST00000201273 1387 ntBASIC20.68■□□□□ 0.9
Knl1Q66JQ7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Knl1Q66JQ7 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Knl1Q66JQ7 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Knl1Q66JQ7 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Knl1Q66JQ7 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Knl1Q66JQ7 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Knl1Q66JQ7 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC20.67■□□□□ 0.9
Knl1Q66JQ7 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Knl1Q66JQ7 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Knl1Q66JQ7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.67■□□□□ 0.9
Knl1Q66JQ7 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Knl1Q66JQ7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Knl1Q66JQ7 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.67■□□□□ 0.9
Knl1Q66JQ7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Knl1Q66JQ7 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC20.67■□□□□ 0.9
Knl1Q66JQ7 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Knl1Q66JQ7 Gm10275-202ENSMUST00000168697 495 ntBASIC20.67■□□□□ 0.9
Knl1Q66JQ7 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Knl1Q66JQ7 AC159896.2-201ENSMUST00000214753 269 ntBASIC20.67■□□□□ 0.9
Knl1Q66JQ7 AC154319.1-201ENSMUST00000216330 312 ntBASIC20.67■□□□□ 0.9
Knl1Q66JQ7 AC156560.2-201ENSMUST00000221232 264 ntBASIC20.67■□□□□ 0.9
Knl1Q66JQ7 AL589735.1-201ENSMUST00000224353 270 ntBASIC20.67■□□□□ 0.9
Knl1Q66JQ7 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
Knl1Q66JQ7 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Knl1Q66JQ7 Gm10275-201ENSMUST00000092620 635 ntBASIC20.67■□□□□ 0.9
Knl1Q66JQ7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Knl1Q66JQ7 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Knl1Q66JQ7 Gm42690-201ENSMUST00000197921 1836 ntBASIC20.67■□□□□ 0.9
Knl1Q66JQ7 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Knl1Q66JQ7 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Knl1Q66JQ7 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Knl1Q66JQ7 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Knl1Q66JQ7 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Knl1Q66JQ7 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC20.66■□□□□ 0.9
Knl1Q66JQ7 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC20.66■□□□□ 0.9
Knl1Q66JQ7 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Knl1Q66JQ7 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Knl1Q66JQ7 Gm7561-201ENSMUST00000211203 886 ntBASIC20.66■□□□□ 0.9
Knl1Q66JQ7 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC20.66■□□□□ 0.9
Knl1Q66JQ7 AC154171.1-201ENSMUST00000224610 643 ntBASIC20.66■□□□□ 0.9
Knl1Q66JQ7 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Knl1Q66JQ7 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Knl1Q66JQ7 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Knl1Q66JQ7 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Knl1Q66JQ7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Knl1Q66JQ7 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Knl1Q66JQ7 Gm9816-201ENSMUST00000122292 1414 ntBASIC20.65■□□□□ 0.9
Knl1Q66JQ7 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms