Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col11a2Q64739 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col11a2Q64739 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col11a2Q64739 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Col11a2Q64739 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col11a2Q64739 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Col11a2Q64739 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col11a2Q64739 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col11a2Q64739 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col11a2Q64739 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col11a2Q64739 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col11a2Q64739 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col11a2Q64739 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col11a2Q64739 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col11a2Q64739 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col11a2Q64739 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col11a2Q64739 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.78■□□□□ 0.44
Col11a2Q64739 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col11a2Q64739 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Col11a2Q64739 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Col11a2Q64739 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC17.78■□□□□ 0.44
Col11a2Q64739 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col11a2Q64739 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col11a2Q64739 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col11a2Q64739 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.78■□□□□ 0.44
Col11a2Q64739 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col11a2Q64739 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col11a2Q64739 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col11a2Q64739 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col11a2Q64739 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col11a2Q64739 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col11a2Q64739 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col11a2Q64739 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC17.77■□□□□ 0.44
Col11a2Q64739 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC17.77■□□□□ 0.44
Col11a2Q64739 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC17.77■□□□□ 0.44
Col11a2Q64739 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col11a2Q64739 Gm43179-201ENSMUST00000198797 275 ntBASIC17.77■□□□□ 0.44
Col11a2Q64739 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col11a2Q64739 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col11a2Q64739 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col11a2Q64739 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col11a2Q64739 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col11a2Q64739 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.76■□□□□ 0.43
Col11a2Q64739 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC17.76■□□□□ 0.43
Col11a2Q64739 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC17.76■□□□□ 0.43
Col11a2Q64739 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Col11a2Q64739 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Col11a2Q64739 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col11a2Q64739 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC17.76■□□□□ 0.43
Col11a2Q64739 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Col11a2Q64739 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC17.76■□□□□ 0.43
Col11a2Q64739 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Col11a2Q64739 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col11a2Q64739 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col11a2Q64739 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
Col11a2Q64739 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC17.76■□□□□ 0.43
Col11a2Q64739 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col11a2Q64739 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.76■□□□□ 0.43
Col11a2Q64739 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.76■□□□□ 0.43
Col11a2Q64739 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col11a2Q64739 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Col11a2Q64739 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col11a2Q64739 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col11a2Q64739 Gm24196-201ENSMUST00000179161 110 ntBASIC17.75■□□□□ 0.43
Col11a2Q64739 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col11a2Q64739 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC17.75■□□□□ 0.43
Col11a2Q64739 AC125117.1-201ENSMUST00000228121 468 ntBASIC17.75■□□□□ 0.43
Col11a2Q64739 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col11a2Q64739 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col11a2Q64739 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col11a2Q64739 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.75■□□□□ 0.43
Col11a2Q64739 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col11a2Q64739 AL645783.1-201ENSMUST00000221416 1832 ntBASIC17.75■□□□□ 0.43
Col11a2Q64739 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col11a2Q64739 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col11a2Q64739 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC17.75■□□□□ 0.43
Col11a2Q64739 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC17.75■□□□□ 0.43
Col11a2Q64739 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC17.75■□□□□ 0.43
Col11a2Q64739 Gm5425-201ENSMUST00000214125 459 ntBASIC17.75■□□□□ 0.43
Col11a2Q64739 AC140451.2-201ENSMUST00000228030 664 ntBASIC17.75■□□□□ 0.43
Col11a2Q64739 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col11a2Q64739 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Col11a2Q64739 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Col11a2Q64739 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col11a2Q64739 Gm42853-201ENSMUST00000201273 1387 ntBASIC17.74■□□□□ 0.43
Col11a2Q64739 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col11a2Q64739 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col11a2Q64739 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col11a2Q64739 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col11a2Q64739 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col11a2Q64739 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col11a2Q64739 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col11a2Q64739 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col11a2Q64739 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col11a2Q64739 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Col11a2Q64739 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col11a2Q64739 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col11a2Q64739 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC17.74■□□□□ 0.43
Col11a2Q64739 Gm9728-201ENSMUST00000200197 1055 ntBASIC17.74■□□□□ 0.43
Col11a2Q64739 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms