Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn9aQ62205 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scn9aQ62205 AC154527.2-201ENSMUST00000225256 1466 ntBASIC17.34■□□□□ 0.37
Scn9aQ62205 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scn9aQ62205 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn9aQ62205 Gm8062-201ENSMUST00000139696 444 ntBASIC17.33■□□□□ 0.37
Scn9aQ62205 Mir7654-201ENSMUST00000185082 70 ntBASIC17.33■□□□□ 0.37
Scn9aQ62205 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scn9aQ62205 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scn9aQ62205 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Scn9aQ62205 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Scn9aQ62205 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scn9aQ62205 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Scn9aQ62205 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scn9aQ62205 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scn9aQ62205 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.37
Scn9aQ62205 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn9aQ62205 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Scn9aQ62205 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn9aQ62205 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Scn9aQ62205 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Scn9aQ62205 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.33■□□□□ 0.36
Scn9aQ62205 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn9aQ62205 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Scn9aQ62205 Snora78-201ENSMUST00000158630 128 ntBASIC17.33■□□□□ 0.36
Scn9aQ62205 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Scn9aQ62205 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Scn9aQ62205 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn9aQ62205 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.33■□□□□ 0.36
Scn9aQ62205 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn9aQ62205 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Scn9aQ62205 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.33■□□□□ 0.36
Scn9aQ62205 Gm45751-201ENSMUST00000210185 1573 ntBASIC17.32■□□□□ 0.36
Scn9aQ62205 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC17.32■□□□□ 0.36
Scn9aQ62205 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn9aQ62205 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scn9aQ62205 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.32■□□□□ 0.36
Scn9aQ62205 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.32■□□□□ 0.36
Scn9aQ62205 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn9aQ62205 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scn9aQ62205 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn9aQ62205 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.32■□□□□ 0.36
Scn9aQ62205 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn9aQ62205 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn9aQ62205 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn9aQ62205 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn9aQ62205 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn9aQ62205 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn9aQ62205 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scn9aQ62205 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn9aQ62205 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn9aQ62205 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scn9aQ62205 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scn9aQ62205 AC121804.3-201ENSMUST00000223420 295 ntBASIC17.31■□□□□ 0.36
Scn9aQ62205 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Scn9aQ62205 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn9aQ62205 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scn9aQ62205 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn9aQ62205 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn9aQ62205 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Scn9aQ62205 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Scn9aQ62205 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Scn9aQ62205 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn9aQ62205 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.31■□□□□ 0.36
Scn9aQ62205 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC17.31■□□□□ 0.36
Scn9aQ62205 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn9aQ62205 Gm5279-201ENSMUST00000199575 745 ntBASIC17.31■□□□□ 0.36
Scn9aQ62205 Gm6916-202ENSMUST00000205523 195 ntBASIC17.31■□□□□ 0.36
Scn9aQ62205 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn9aQ62205 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn9aQ62205 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn9aQ62205 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Scn9aQ62205 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Scn9aQ62205 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC17.3■□□□□ 0.36
Scn9aQ62205 Gm17420-201ENSMUST00000164753 153 ntBASIC17.3■□□□□ 0.36
Scn9aQ62205 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC17.3■□□□□ 0.36
Scn9aQ62205 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC17.3■□□□□ 0.36
Scn9aQ62205 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scn9aQ62205 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn9aQ62205 AC154846.1-201ENSMUST00000226278 862 ntBASIC17.3■□□□□ 0.36
Scn9aQ62205 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn9aQ62205 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn9aQ62205 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn9aQ62205 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scn9aQ62205 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Scn9aQ62205 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn9aQ62205 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scn9aQ62205 Gm5912-201ENSMUST00000122282 1438 ntBASIC17.3■□□□□ 0.36
Scn9aQ62205 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scn9aQ62205 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Scn9aQ62205 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn9aQ62205 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn9aQ62205 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC17.29■□□□□ 0.36
Scn9aQ62205 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn9aQ62205 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Scn9aQ62205 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn9aQ62205 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn9aQ62205 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scn9aQ62205 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC17.29■□□□□ 0.36
Scn9aQ62205 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 116.7 ms